Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   K6973_RS09070 Genome accession   NZ_CP082206
Coordinates   1814892..1815617 (-) Length   241 a.a.
NCBI ID   WP_218654770.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain DY107     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1809892..1820617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS09040 (K6973_09040) nusA 1810085..1811242 (-) 1158 WP_003052330.1 transcription termination factor NusA -
  K6973_RS09045 (K6973_09045) rimP 1811385..1811879 (-) 495 WP_044022604.1 ribosome maturation factor RimP -
  K6973_RS09055 (K6973_09055) trmB 1812364..1812999 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  K6973_RS09060 (K6973_09060) - 1812999..1813790 (-) 792 WP_003052472.1 phosphotransferase family protein -
  K6973_RS09065 (K6973_09065) - 1813855..1814889 (-) 1035 WP_222819273.1 ABC transporter permease -
  K6973_RS09070 (K6973_09070) pptA 1814892..1815617 (-) 726 WP_218654770.1 ABC transporter ATP-binding protein Regulator
  K6973_RS09075 (K6973_09075) - 1815689..1816108 (+) 420 WP_012767493.1 HIT family protein -
  K6973_RS09080 (K6973_09080) - 1816105..1816425 (+) 321 WP_138126343.1 chemotaxis protein -
  K6973_RS09085 (K6973_09085) - 1816587..1817855 (-) 1269 WP_138126345.1 LCP family protein -
  K6973_RS09090 (K6973_09090) - 1817867..1818388 (-) 522 WP_218654771.1 N-acetyltransferase -
  K6973_RS09095 (K6973_09095) tsaE 1818381..1818824 (-) 444 WP_115247110.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  K6973_RS09100 (K6973_09100) - 1819005..1820465 (-) 1461 WP_222819274.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26372.59 Da        Isoelectric Point: 4.6450

>NTDB_id=600120 K6973_RS09070 WP_218654770.1 1814892..1815617(-) (pptA) [Streptococcus dysgalactiae strain DY107]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLAADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDGSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=600120 K6973_RS09070 WP_218654770.1 1814892..1815617(-) (pptA) [Streptococcus dysgalactiae strain DY107]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGGCTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGACGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCGAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGGTTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCGTTTGGTGATGGTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743