Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   K6969_RS10335 Genome accession   NZ_CP082205
Coordinates   2149601..2150335 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   G7SIC8
Organism   Streptococcus suis strain AKJ18     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2144601..2155335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6969_RS10305 (K6969_10195) rnpM 2144816..2145112 (-) 297 WP_171942715.1 RNase P modulator RnpM -
  K6969_RS10310 (K6969_10200) nusA 2145129..2146283 (-) 1155 WP_043025746.1 transcription termination factor NusA -
  K6969_RS10315 (K6969_10205) rimP 2146357..2146827 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  K6969_RS10320 (K6969_10210) trmB 2147085..2147723 (-) 639 WP_171942716.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  K6969_RS10325 (K6969_10215) ccrZ 2147720..2148514 (-) 795 WP_002942360.1 cell cycle regulator CcrZ -
  K6969_RS10330 (K6969_10220) - 2148564..2149604 (-) 1041 WP_171942717.1 ABC transporter permease -
  K6969_RS10335 (K6969_10225) pptA 2149601..2150335 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  K6969_RS10340 (K6969_10230) - 2150398..2150811 (+) 414 WP_171942718.1 HIT family protein -
  K6969_RS10345 (K6969_10235) - 2150813..2151142 (+) 330 WP_171942719.1 chemotaxis protein -
  K6969_RS10350 (K6969_10240) - 2152614..2153735 (-) 1122 WP_061366882.1 IS110 family transposase -
  K6969_RS10355 (K6969_10245) - 2153874..2155067 (-) 1194 WP_029944194.1 LCP family protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=600063 K6969_RS10335 WP_002942356.1 2149601..2150335(-) (pptA) [Streptococcus suis strain AKJ18]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=600063 K6969_RS10335 WP_002942356.1 2149601..2150335(-) (pptA) [Streptococcus suis strain AKJ18]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGATTTAATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCCATTCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SIC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721