Detailed information NTG0599792

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NC855_RS00265
• Genome accession: NZ_CP098472
• Coordinates: 52749..55865 (-)
• Length: 1038 a.a.
• NCBI ID: WP_263059815.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10612
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 47749..60865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NC855_RS00245 (NC855_00245)	-	49139..49528 (-)	390	WP_003687278.1	DUF559 domain-containing protein	-
NC855_RS00255 (NC855_00255)	-	49691..50070 (-)	380	Protein_48	VOC family protein	-
NC855_RS00260 (NC855_00260)	carA	50124..51257 (-)	1134	WP_003699436.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
NC855_RS00265 (NC855_00265)	pilC	52749..55865 (-)	3117	WP_263059815.1	PilC family type IV pilus tip adhesin	Machinery gene
NC855_RS00270 (NC855_00270)	apbC	57591..58670 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
NC855_RS00280 (NC855_00280)	-	59044..59553 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
NC855_RS00285 (NC855_00285)	nadR	59894..60334 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1038 a.a.
• Molecular weight: 113510.11 Da
• Isoelectric Point: 9.9653

>NTDB_id=599792 NC855_RS00265 WP_263059815.1 52749..55865(-) (pilC) [Neisseria gonorrhoeae strain 10612]
MNKTLKRRVFRHTALYAAILMFSHTGGGGGAMAETREYAIIMNGRNQPEVQWSVPSSIKYKDRKRKYTHYKYPQGGSSVS
FNNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAVDWIRTTRIALAGYSYAGVVCNSTTGCPKLVYKTRFS
FDNPDLAKTGSRLNRHTEPSRDNSPIYKLKDYPWLGVSFNLGAEGTAKDGKVTNKLVSSFDENNSNSNQNLVYTTEGHNI
SLGNWQRESTAMAYYLNAKLHLLDKKKIKDITSKTVRLGVLKPSIDVRKGNTGLSGILSFWATWDIKDTGQIPVKLGLPQ
VKAGRCTNAAHPNPKVKPLSPALTAPALWFGPAQNGKVQMYSASVSTYPGSSSSRIFLQELKTKTDPGRPGRHSLAALNE
RDIKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGFNDNDGKNDTFGIYKDRLVIPEPDEWSEVLLPWTARYYGNDDIF
KTFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYI
PGTMPRKDIESNDSTLAQELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDNSNL
TGVSMFDVKNESKNNGVKLGYTVGTPQIGKIRNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGGGSLIKKIEAPGGK
GGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQ
DVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTA
FVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYD
KPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3117 bp

>NTDB_id=599792 NC855_RS00265 WP_263059815.1 52749..55865(-) (pilC) [Neisseria gonorrhoeae strain 10612]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGCGATGGCGGAAACCCGTGAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTACAGTGGAGTG
TGCCATCTTCAATAAAGTACAAAGACAGGAAGCGCAAATATACTCATTATAAGTACCCACAAGGAGGAAGCTCTGTCTCA
TTCAACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATACCGATAGTCTGAAAGGGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACAGCTACGCCGGTGTCGTATGCAACAGCACCACAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTTCC
TTCGATAATCCCGACTTGGCAAAAACAGGAAGCAGGCTGAATAGGCACACAGAGCCAAGCCGCGACAATTCGCCCATTTA
CAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGGTAACCA
ACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTCGTCTATACCACGGAAGGCCACAATATT
TCCTTGGGCAACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAA
GATTAAAGATATCACCAGCAAAACAGTGCGGTTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATACGGGGC
TTAGCGGCATTCTATCTTTTTGGGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAA
GTCAAAGCCGGGCGCTGCACCAACGCCGCCCACCCCAATCCCAAGGTCAAACCCCTTTCGCCGGCACTGACCGCCCCCGC
GCTGTGGTTCGGCCCTGCGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGTTCGAGCA
GCCGCATCTTCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATGAA
CGAGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGC
CCCGGGCAATAGCGGCCGGGTCGCGGGTTTTAATGACAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGC
TCGTCATACCTGAGCCCGACGAGTGGAGCGAAGTGCTGCTGCCTTGGACGGCCCGGTATTACGGTAATGACGATATATTT
AAAACATTCAACCAACCAAACAACAAAAAACAAAGCGACAAAAAACAATACAGCCAAAAATACCGCATCCGCACAAAAGA
AGATGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATCTGGCAACTT
CTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATC
CCGGGTACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCCAAGAGCTGCGCACCTTTGCCGAAAAAGG
CTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATT
TCTTTATGTTTGGTGCGATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAACAGCAACCTG
ACCGGCGTTTCCATGTTTGATGTCAAAAACGAGAGTAAAAATAATGGCGTGAAATTAGGCTACACCGTCGGTACGCCGCA
AATCGGCAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGTCAGCAGCGATA
ATACAACCGCGCTGTATGTGTATGATTTGGGAAACGGCGGTGGTAGTCTGATTAAAAAAATCGAAGCACCCGGCGGCAAA
GGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGG
CAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGA
TTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAG
GATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAA
CGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGAT
CGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCC
TTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGG
CGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAA
CCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGAC
AAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAG
CGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGA
ACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (516-847)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	70.247	100	0.712