Detailed information NTG0599718

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NC854_RS00270
• Genome accession: NZ_CP098470
• Coordinates: 52740..55820 (-)
• Length: 1026 a.a.
• NCBI ID: WP_260247678.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10792
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 47740..60820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NC854_RS00250 (NC854_00250)	-	49130..49519 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
NC854_RS00260 (NC854_00260)	-	49682..50061 (-)	380	Protein_49	VOC family protein	-
NC854_RS00265 (NC854_00265)	carA	50115..51248 (-)	1134	WP_003699436.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
NC854_RS00270 (NC854_00270)	pilC	52740..55820 (-)	3081	WP_260247678.1	PilC family type IV pilus tip adhesin	Machinery gene
NC854_RS00275 (NC854_00275)	apbC	57825..58904 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
NC854_RS00285 (NC854_00285)	-	59278..59787 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
NC854_RS00290 (NC854_00290)	nadR	60128..60568 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1026 a.a.
• Molecular weight: 112659.15 Da
• Isoelectric Point: 9.8639

>NTDB_id=599718 NC854_RS00270 WP_260247678.1 52740..55820(-) (pilC) [Neisseria gonorrhoeae strain 10792]
MNKTLKRRVFRHTALYAAILMFSHTGGGGAMAETREYAIIMNAQNRPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNN
FISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADALKERANAVDWIRTTWPGLAGYAYTDVICRDAGQCPQLVYET
KFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTRDRP
ISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDLGTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPEVKA
GRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIK
SRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNK
FKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIE
SNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGAMGLGGRGAYALDLSKTNGNYPAAASLFDVKDGDKKGK
NRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKD
LDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYG
IFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGC
GADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKK
TDDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3081 bp

>NTDB_id=599718 NC854_RS00270 WP_260247678.1 52740..55820(-) (pilC) [Neisseria gonorrhoeae strain 10792]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGGAAACCCGTGAATACGCTATTATCATGAACGCGCAAAACCGGCCCGAGGTAAAGTCGAATGTGC
CATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGACTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAAT
TTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAAAAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCT
GGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATGCAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACC
AAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTC
GCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCA
GATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACACGAGACCGCCCT
ATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAA
AAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACT
GGCTAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCA
GGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGG
CCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCTTCC
TCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAA
AGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAG
CAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAG
CGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAA
TTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGG
CGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCA
AAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAA
AGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGG
CGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCT
TGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGCTTCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAA
AATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTT
CCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCAACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACA
CCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGAT
TTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCC
GTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACA
AACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGT
ATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAA
AGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAG
GACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGC
GGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCC
GGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGG
AAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAA
ACAGACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAA
CAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGT
GCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (506-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.996	100	0.746