Detailed information
Bioinformatically predicted
Overview
| Name | cytR | Type | Regulator |
| Locus tag | K6J60_RS02815 | Genome accession | NZ_AP018778 |
| Coordinates | 552130..553128 (-) | Length | 332 a.a. |
| NCBI ID | WP_005686992.1 | Uniprot ID | A0ABY1VT38 |
| Organism | Haemophilus influenzae strain CHBN-III-7 isolate 15H01 | ||
| Function | promote competence gene expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 547130..558128
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J60_RS02780 | - | 547465..547584 (+) | 120 | WP_105894686.1 | Com family DNA-binding transcriptional regulator | - |
| K6J60_RS02785 (CHBNIII7_05220) | - | 547641..548486 (+) | 846 | WP_118807535.1 | hypothetical protein | - |
| K6J60_RS02790 (CHBNIII7_05230) | - | 548526..548789 (-) | 264 | WP_118807534.1 | hypothetical protein | - |
| K6J60_RS02795 (CHBNIII7_05240) | tsaA | 549101..549820 (-) | 720 | WP_040034525.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| K6J60_RS02800 (CHBNIII7_05250) | menA | 549882..550793 (+) | 912 | WP_118807533.1 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | - |
| K6J60_RS02805 (CHBNIII7_05260) | rraA | 550845..551333 (+) | 489 | WP_005669389.1 | ribonuclease E activity regulator RraA | - |
| K6J60_RS02810 (CHBNIII7_05270) | - | 551473..552024 (-) | 552 | WP_006995184.1 | TIGR00645 family protein | - |
| K6J60_RS02815 (CHBNIII7_05280) | cytR | 552130..553128 (-) | 999 | WP_005686992.1 | substrate-binding domain-containing protein | Regulator |
| K6J60_RS02820 (CHBNIII7_05290) | rbsK | 553156..554076 (-) | 921 | WP_012055070.1 | ribokinase | - |
| K6J60_RS02825 (CHBNIII7_05300) | rbsB | 554174..555052 (-) | 879 | WP_005639843.1 | ribose ABC transporter substrate-binding protein RbsB | - |
| K6J60_RS02830 (CHBNIII7_05310) | rbsC | 555072..556040 (-) | 969 | WP_012055069.1 | ribose ABC transporter permease | - |
| K6J60_RS02835 (CHBNIII7_05320) | rbsA | 556056..557537 (-) | 1482 | WP_118807532.1 | ribose ABC transporter ATP-binding protein RbsA | - |
| K6J60_RS02840 (CHBNIII7_05330) | rbsD | 557551..557970 (-) | 420 | WP_005664526.1 | D-ribose pyranase | - |
Sequence
Protein
Download Length: 332 a.a. Molecular weight: 36749.46 Da Isoelectric Point: 7.9562
>NTDB_id=59969 K6J60_RS02815 WP_005686992.1 552130..553128(-) (cytR) [Haemophilus influenzae strain CHBN-III-7 isolate 15H01]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK
Nucleotide
Download Length: 999 bp
>NTDB_id=59969 K6J60_RS02815 WP_005686992.1 552130..553128(-) (cytR) [Haemophilus influenzae strain CHBN-III-7 isolate 15H01]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCTATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCACTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATATCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCTATTTCGCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCACTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATATCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cytR | Vibrio parahaemolyticus RIMD 2210633 |
36.89 |
98.795 |
0.364 |
| cytR | Vibrio cholerae C6706 |
36.585 |
98.795 |
0.361 |