Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   L897_RS09055 Genome accession   NC_021807
Coordinates   1817574..1818350 (+) Length   258 a.a.
NCBI ID   WP_042361541.1    Uniprot ID   -
Organism   Streptococcus pyogenes HSC5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1812574..1823350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L897_RS09035 (L897_09260) - 1814197..1815177 (-) 981 WP_168390208.1 IS30 family transposase -
  L897_RS09045 (L897_09270) rlmH 1815572..1816051 (-) 480 WP_002994924.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  L897_RS09050 (L897_09275) htrA 1816262..1817485 (+) 1224 WP_002994926.1 S1C family serine protease Regulator
  L897_RS09055 (L897_09280) spo0J 1817574..1818350 (+) 777 WP_042361541.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29090.89 Da        Isoelectric Point: 10.3100

>NTDB_id=59955 L897_RS09055 WP_042361541.1 1817574..1818350(+) (spo0J) [Streptococcus pyogenes HSC5]
MTKELLIDLPIEDIITNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNFNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=59955 L897_RS09055 WP_042361541.1 1817574..1818350(+) (spo0J) [Streptococcus pyogenes HSC5]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTATTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGCAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACTTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTAGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCAATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581


Multiple sequence alignment