Detailed information NTG0599486

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NC849_RS10260
• Genome accession: NZ_CP098462
• Coordinates: 1944547..1947666 (+)
• Length: 1039 a.a.
• NCBI ID: WP_260245429.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 9460
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1939547..1952666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NC849_RS10240 (NC849_10165)	-	1940240..1940689 (-)	450	WP_003688065.1	CopD family copper resistance protein	-
NC849_RS10245 (NC849_10170)	waaA	1940730..1942001 (-)	1272	WP_025455875.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
NC849_RS10250 (NC849_10175)	gnd	1942064..1943512 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
NC849_RS10255 (NC849_10180)	-	1943592..1943855 (-)	264	WP_017147189.1	hypothetical protein	-
NC849_RS10260 (NC849_10185)	pilC	1944547..1947666 (+)	3120	WP_260245429.1	PilC family type IV pilus tip adhesin	Machinery gene
NC849_RS10265 (NC849_10190)	-	1948623..1948907 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NC849_RS10270 (NC849_10195)	yccS	1949582..1951732 (-)	2151	WP_003697785.1	YccS family putative transporter	-

Sequence

Protein

• Length: 1039 a.a.
• Molecular weight: 114007.38 Da
• Isoelectric Point: 9.9363

>NTDB_id=599486 NC849_RS10260 WP_260245429.1 1944547..1947666(+) (pilC) [Neisseria gonorrhoeae strain 9460]
MNKTLKRQVFRHTALYAAILMFSHTGGGGAMAQTYKYAIVMNAQNQPEVRRNGQYSTIKGKDREREYTYHNTRGGGGSVS
FNNTDTLVSQQSGTAVFGTATYLPPYGKVSGFDADALEERNNAVDWIRTTRIALAGYSYAGVICKSSNQCPQLVYETKFA
FGQQGLQRKGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNSKSFNKLISSFNEDNNNQTIVSTTRDHPISL
GNWQREHTAVAYYLNAKLHLLDKKRIEDIAQGKTVDLGTLRPRVETTGRGWLSFWARWDIKDTGQIPVKLGLPQVKAGRC
INKLNPNKNTKAPSPALTAPALWFGPGQDGKVQMYSASVSTYPDSSSSRIYLQNLKRKTEHGKPGRYSLVTLNENDIKSR
QPNFMGRQTIIRLDDGVHLIKTNGSKDEVVAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPGNDDKFK
SINQKPEKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPGTMPRKDIESK
DSTLAKELRTFAEKGYVGDRYGVDGGFVLRQVELRGQKHVFMFGAMGLGGRGAYALDLSKINGNYPAAAPLFDVKNGDNN
GKNRVELGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDGPTNTTALSTNTTALSTNTTALYVYDLNDTLGTPIAKIEVKD
GKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDNDPNKWTVRTIFQGTKPITSAPAVSRLKDKRVVIFGTGSDLT
EDDVLNTDEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTVKPTVVL
RTAFVTIRSYTGNDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSVPIGCMWKNGKTVCPNGYVY
DKPVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3120 bp

>NTDB_id=599486 NC849_RS10260 WP_260245429.1 1944547..1947666(+) (pilC) [Neisseria gonorrhoeae strain 9460]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGCGATGGCGCAAACGTATAAATACGCTATTGTGATGAACGCGCAAAACCAGCCCGAGGTACGGCGGAATGGGC
AATATTCAACAATAAAGGGCAAAGACAGGGAGCGCGAATATACTTATCATAACACACGAGGAGGAGGAGGCTCTGTCTCA
TTCAACAATACCGATACCCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGG
CAAGGTTTCCGGTTTTGATGCCGACGCTCTGGAAGAGCGCAACAATGCCGTCGATTGGATTCGTACCACCCGCATCGCGC
TGGCAGGCTACAGCTACGCCGGCGTCATATGCAAAAGCAGCAACCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCC
TTCGGTCAACAAGGGTTGCAAAGAAAGGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTA
CAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATAGCAAATCATTCA
ACAAATTGATATCTTCTTTTAATGAAGACAATAATAATCAAACCATCGTCTCTACGACACGAGACCACCCTATTTCCCTT
GGCAACTGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAGGATTGA
AGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAGGCTGGCTAAGTT
TTTGGGCTAGGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCAGGCCGCTGC
ATCAACAAACTGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGACCTGG
GCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGAGCAGCCGCATCTACCTTCAAA
ATCTGAAAAGAAAAACCGAACACGGCAAACCCGGCCGCTATTCCCTCGTAACCTTGAATGAGAATGATATTAAAAGTCGA
CAGCCGAATTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAAACGAATGGAAGCAAGGA
TGAGGTCGTCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACG
TCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGGTAATGACGATAAATTTAAA
TCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGATTTGGGCGACATCGT
CAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACGACGGGATGGTGCATATCTTCAAAAAAAACG
GCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGCCGCGCAAGGATATTGAAAGCAAA
GATTCTACACTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTT
TGTCTTGCGCCAAGTCGAACTGCGCGGGCAAAAACACGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGT
ATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCTCCCCTGTTTGATGTCAAAAATGGCGATAATAAC
GGCAAAAATCGCGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAATCCGCAACGGCAAATACGCCGCCTT
CCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGGCCCAACAAATACAACCGCGCTGTCAACAAATACAACCGCGCTGT
CAACAAATACAACCGCGCTGTATGTATATGATTTGAACGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGAC
GGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCG
GGGCGGGAATATGTACCGCTTTGATTTGAGCGACAACGACCCGAACAAATGGACTGTACGCACTATTTTCCAAGGCACAA
AACCGATTACTTCCGCGCCCGCCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACC
GAAGATGATGTACTGAATACGGACGAACAATATATTTACGGCATCTTCGACGACGATAAGGCGGCGAATAATGTAAATGC
AAGCCGCGGCGTTTTGGGGAGCGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACATTATTCCTGAACAAGAGAT
CCGACGGTTCGGGCAGCAAGGGCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTCAAACCGACCGTGGTATTG
CGTACCGCCTTCGTAACCATCCGCAGCTATACGGGTAATGACAAATGTGGCGCGCAAACCGCCATTTTGGGCATCAATAC
CGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGCAATATTCCGGCCATC
AGAAAATGAACGGCAAGTCCGTCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCGAACGGATATGTTTAC
GACAAGCCGGTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGG
CAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGA
TGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (503-851)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.575	100	0.759