Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   L897_RS06910 Genome accession   NC_021807
Coordinates   1372155..1372880 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes HSC5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1367155..1377880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L897_RS06875 (L897_07060) rnpM 1367189..1367485 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  L897_RS06880 (L897_07065) nusA 1367501..1368658 (-) 1158 WP_002994325.1 transcription termination factor NusA -
  L897_RS06885 (L897_07070) rimP 1368833..1369369 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  L897_RS06895 (L897_07080) trmB 1369628..1370263 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  L897_RS06900 (L897_07085) ccrZ 1370263..1371054 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  L897_RS06905 (L897_07090) - 1371118..1372152 (-) 1035 WP_020837588.1 ABC transporter permease -
  L897_RS06910 (L897_07095) pptA 1372155..1372880 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  L897_RS06915 (L897_07100) - 1372952..1373371 (+) 420 WP_002983376.1 HIT family protein -
  L897_RS06920 (L897_07105) - 1373368..1373724 (+) 357 WP_002988657.1 hypothetical protein -
  L897_RS06925 (L897_07110) brpA 1373834..1375108 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  L897_RS06930 (L897_07115) - 1375117..1375641 (-) 525 WP_020837596.1 GNAT family N-acetyltransferase -
  L897_RS06935 (L897_07120) tsaE 1375616..1376077 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  L897_RS06940 (L897_07125) - 1376231..1377691 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=59944 L897_RS06910 WP_002983379.1 1372155..1372880(-) (pptA) [Streptococcus pyogenes HSC5]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=59944 L897_RS06910 WP_002983379.1 1372155..1372880(-) (pptA) [Streptococcus pyogenes HSC5]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment