Detailed information NTG0599200

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NCL52_RS08665
• Genome accession: NZ_CP098417
• Coordinates: 1670393..1671382 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain N2-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1665393..1676382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NCL52_RS08650 (NCL52_08650)	acpP	1665590..1665823 (+)	234	WP_003154310.1	acyl carrier protein	-
NCL52_RS08655 (NCL52_08655)	rncS	1665963..1666712 (+)	750	WP_003232030.1	ribonuclease III	-
NCL52_RS08660 (NCL52_08660)	smc	1666813..1670373 (+)	3561	WP_024572419.1	chromosome segregation protein SMC	-
NCL52_RS08665 (NCL52_08665)	pilA	1670393..1671382 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
NCL52_RS08670 (NCL52_08670)	sivC	1671418..1671903 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
NCL52_RS08675 (NCL52_08675)	srpM	1672081..1672413 (+)	333	WP_003238590.1	putative DNA-binding protein	-
NCL52_RS08680 (NCL52_08680)	ffh	1672427..1673767 (+)	1341	WP_014479771.1	signal recognition particle protein	-
NCL52_RS08685 (NCL52_08685)	rpsP	1673873..1674145 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
NCL52_RS08690 (NCL52_08690)	khpA	1674145..1674390 (+)	246	WP_014476792.1	KH domain-containing protein	-
NCL52_RS08695 (NCL52_08695)	ylqD	1674512..1674898 (+)	387	WP_014476793.1	YlqD family protein	-
NCL52_RS08700 (NCL52_08700)	rimM	1674903..1675427 (+)	525	WP_024572420.1	ribosome maturation factor RimM	-
NCL52_RS08705 (NCL52_08705)	trmD	1675424..1676155 (+)	732	WP_029945957.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=599200 NCL52_RS08665 WP_003232026.1 1670393..1671382(+) (pilA) [Bacillus subtilis strain N2-10]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=599200 NCL52_RS08665 WP_003232026.1 1670393..1671382(+) (pilA) [Bacillus subtilis strain N2-10]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGACGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCTGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGGGCCATTGAACAGCTGGAAGTGTGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTGAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401