Detailed information NTG0599141

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NCL52_RS01670
• Genome accession: NZ_CP098417
• Coordinates: 302845..303966 (+)
• Length: 373 a.a.
• NCBI ID: WP_064672038.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain N2-10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 297845..308966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NCL52_RS01645 (NCL52_01645)	ycdA	297854..298918 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
NCL52_RS01650 (NCL52_01650)	-	298919..299071 (-)	153	WP_021481864.1	hypothetical protein	-
NCL52_RS01655 (NCL52_01655)	ycdB	299245..300663 (+)	1419	WP_086343414.1	YcdB/YcdC domain-containing protein	-
NCL52_RS01660 (NCL52_01660)	ycdC	300850..302211 (+)	1362	WP_128738577.1	YcdB/YcdC domain-containing protein	-
NCL52_RS01665 (NCL52_01665)	cwlK	302219..302722 (-)	504	WP_124073440.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
NCL52_RS01670 (NCL52_01670)	rapF	302845..303966 (+)	1122	WP_064672038.1	response regulator aspartate phosphatase RapJ	Regulator
NCL52_RS01675 (NCL52_01675)	ycdF	304073..304849 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
NCL52_RS01680 (NCL52_01680)	ycdG	304874..306559 (+)	1686	WP_251107058.1	alpha-glucosidase	-
NCL52_RS01685 (NCL52_01685)	znuA	306747..307706 (+)	960	WP_086343416.1	metal ABC transporter substrate-binding protein	-
NCL52_RS01690 (NCL52_01690)	znuC	307762..308457 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44443.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=599141 NCL52_RS01670 WP_064672038.1 302845..303966(+) (rapF) [Bacillus subtilis strain N2-10]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSASEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=599141 NCL52_RS01670 WP_064672038.1 302845..303966(+) (rapF) [Bacillus subtilis strain N2-10]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTATACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGTCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405