Detailed information NTG0059899

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J69_RS01420
• Genome accession: NZ_AP018777
• Coordinates: 278758..279762 (+)
• Length: 334 a.a.
• NCBI ID: WP_110431213.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-6 isolate 13H31
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 273758..284762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J69_RS01400 (CHBNIII6_02770)	rmuC	273868..275310 (+)	1443	WP_110431216.1	DNA recombination protein RmuC	-
K6J69_RS01405 (CHBNIII6_02780)	-	275498..276430 (+)	933	WP_005691310.1	nucleoside hydrolase	-
K6J69_RS01410 (CHBNIII6_02790)	-	276474..277721 (+)	1248	WP_110431215.1	NupC/NupG family nucleoside CNT transporter	-
K6J69_RS01415 (CHBNIII6_02800)	rbsK	277807..278730 (+)	924	WP_110431214.1	ribokinase	-
K6J69_RS01420 (CHBNIII6_02810)	cytR	278758..279762 (+)	1005	WP_110431213.1	substrate-binding domain-containing protein	Regulator
K6J69_RS01425 (CHBNIII6_02820)	-	279872..280423 (+)	552	WP_050837863.1	TIGR00645 family protein	-
K6J69_RS01430 (CHBNIII6_02830)	rraA	280555..281043 (-)	489	WP_021034614.1	ribonuclease E activity regulator RraA	-
K6J69_RS01435 (CHBNIII6_02840)	menA	281095..282006 (-)	912	WP_110431212.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J69_RS01440 (CHBNIII6_02850)	tsaA	282068..282787 (+)	720	WP_110431211.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J69_RS01445 (CHBNIII6_02860)	tehA	282842..283786 (-)	945	WP_192876605.1	dicarboxylate transporter/tellurite-resistance protein TehA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36758.43 Da
• Isoelectric Point: 7.6607

>NTDB_id=59899 K6J69_RS01420 WP_110431213.1 278758..279762(+) (cytR) [Haemophilus influenzae strain CHBN-III-6 isolate 13H31]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVEALLQRIKNPNENYRTLVLEP
TCILRGSISTPSNI

Nucleotide

• Length: 1005 bp

>NTDB_id=59899 K6J69_RS01420 WP_110431213.1 278758..279762(+) (cytR) [Haemophilus influenzae strain CHBN-III-6 isolate 13H31]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCGGAAGTGATGGCAGGC
GTGGAACAATATTGTCAGCAGCATCAATATAATCTTATTATTGCCACCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGCGGCTATTTGGCGACAAAAGCATTAATCGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGATACTATTGCTGTTGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTTGCTGTAGAAGCACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTAGTGTTAGAGCCG
ACCTGTATTTTGAGAGGATCAATTTCTACCCCTTCAAACATATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.048	99.401	0.368
cytR	Vibrio cholerae C6706	36.228	100	0.362