Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K5K95_RS06770 Genome accession   NZ_CP081946
Coordinates   1475284..1475688 (-) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas sp. DR48     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1470284..1480688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5K95_RS06755 (K5K95_06755) - 1472088..1474145 (-) 2058 WP_222588832.1 methyl-accepting chemotaxis protein -
  K5K95_RS06760 (K5K95_06760) - 1474302..1474850 (-) 549 WP_222588833.1 chemotaxis protein CheW -
  K5K95_RS06765 (K5K95_06765) pilH 1474861..1475226 (-) 366 WP_222588834.1 twitching motility response regulator PilH -
  K5K95_RS06770 (K5K95_06770) pilG 1475284..1475688 (-) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  K5K95_RS06775 (K5K95_06775) gshB 1475924..1476895 (+) 972 WP_222588835.1 glutathione synthase -
  K5K95_RS06780 (K5K95_06780) - 1477002..1477901 (+) 900 WP_222588836.1 energy transducer TonB -
  K5K95_RS06785 (K5K95_06785) - 1478083..1478655 (+) 573 WP_090178629.1 YqgE/AlgH family protein -
  K5K95_RS06790 (K5K95_06790) ruvX 1478655..1479092 (+) 438 WP_222588837.1 Holliday junction resolvase RuvX -
  K5K95_RS06795 (K5K95_06795) pyrR 1479193..1479696 (+) 504 WP_222588838.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=598640 K5K95_RS06770 WP_008152601.1 1475284..1475688(-) (pilG) [Pseudomonas sp. DR48]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=598640 K5K95_RS06770 WP_008152601.1 1475284..1475688(-) (pilG) [Pseudomonas sp. DR48]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGCCGTACCGCCGAAACGCTGTT
GAAGAATGTGGGTTGTGAAGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATTGCCGACAATCACCCCGGCA
TTATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATTGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709