Detailed information NTG0598614

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KFZ54_RS22380
• Genome accession: NZ_CP098227
• Coordinates: 4632227..4633252 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain XJ6-3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4627227..4638252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KFZ54_RS22360 (KFZ54_22280)	metJ	4628288..4628605 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
KFZ54_RS22365 (KFZ54_22285)	yiiX	4628789..4629397 (+)	609	WP_000877403.1	YiiX family permuted papain-like enzyme	-
KFZ54_RS22370 (KFZ54_22290)	rpmE	4629458..4629670 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
KFZ54_RS22375 (KFZ54_22295)	priA	4629873..4632071 (+)	2199	WP_088375575.1	primosomal protein N'	Machinery gene
KFZ54_RS22380 (KFZ54_22300)	cytR	4632227..4633252 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
KFZ54_RS22385 (KFZ54_22305)	ftsN	4633344..4634303 (+)	960	WP_000068837.1	cell division protein FtsN	-
KFZ54_RS22390 (KFZ54_22310)	hslV	4634396..4634926 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
KFZ54_RS22395 (KFZ54_22315)	hslU	4634936..4636267 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
KFZ54_RS22400 (KFZ54_22320)	menA	4636334..4637260 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KFZ54_RS22405 (KFZ54_22325)	rraA	4637353..4637838 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=598614 KFZ54_RS22380 WP_000644904.1 4632227..4633252(+) (cytR) [Escherichia coli strain XJ6-3]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=598614 KFZ54_RS22380 WP_000644904.1 4632227..4633252(+) (cytR) [Escherichia coli strain XJ6-3]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCTCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCAATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628