Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K5R88_RS18960 Genome accession   NZ_CP081943
Coordinates   4164828..4165232 (-) Length   134 a.a.
NCBI ID   WP_008026200.1    Uniprot ID   -
Organism   Pseudomonas sp. MM213     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4159828..4170232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5R88_RS18945 (K5R88_18840) - 4161658..4163715 (-) 2058 WP_008026203.1 methyl-accepting chemotaxis protein -
  K5R88_RS18950 (K5R88_18845) - 4163861..4164394 (-) 534 WP_008026202.1 chemotaxis protein CheW -
  K5R88_RS18955 (K5R88_18850) pilH 4164405..4164770 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  K5R88_RS18960 (K5R88_18855) pilG 4164828..4165232 (-) 405 WP_008026200.1 twitching motility response regulator PilG Regulator
  K5R88_RS18965 (K5R88_18860) - 4165221..4165391 (+) 171 WP_157214348.1 hypothetical protein -
  K5R88_RS18970 (K5R88_18865) gshB 4165594..4166547 (+) 954 WP_008026199.1 glutathione synthase -
  K5R88_RS18975 (K5R88_18870) - 4166625..4167524 (+) 900 WP_008026197.1 energy transducer TonB -
  K5R88_RS18980 (K5R88_18875) - 4167728..4168300 (+) 573 WP_032832312.1 YqgE/AlgH family protein -
  K5R88_RS18985 (K5R88_18880) ruvX 4168300..4168737 (+) 438 WP_007945492.1 Holliday junction resolvase RuvX -
  K5R88_RS18990 (K5R88_18885) pyrR 4168820..4169323 (+) 504 WP_008026190.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14540.96 Da        Isoelectric Point: 7.9111

>NTDB_id=598592 K5R88_RS18960 WP_008026200.1 4164828..4165232(-) (pilG) [Pseudomonas sp. MM213]
MGQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=598592 K5R88_RS18960 WP_008026200.1 4164828..4165232(-) (pilG) [Pseudomonas sp. MM213]
ATGGGCCAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCCGAAACGCTGTT
GAAGAATGTGGGTTGTGAAGTCATTACGGCCATCGATGGTTTCGATGCGCTGGCGAAGATTGCCGATCATCATCCTGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATCATGCTGTCGTCCAAGGACGGGTTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTTAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.814

88.06

0.694