Detailed information NTG0598510

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6T44_RS07320
• Genome accession: NZ_CP081937
• Coordinates: 1563109..1564212 (+)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190609E1-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1558109..1569212

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T44_RS07300 (K6T44_07295)	-	1560447..1560920 (+)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-
K6T44_RS07305 (K6T44_07300)	-	1560950..1562140 (+)	1191	WP_065189192.1	carboxypeptidase-like regulatory domain-containing protein	-
K6T44_RS07310 (K6T44_07305)	ruvC	1562164..1562718 (+)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
K6T44_RS07315 (K6T44_07310)	-	1562729..1563106 (+)	378	WP_004918086.1	group III truncated hemoglobin	-
K6T44_RS07320 (K6T44_07315)	dprA	1563109..1564212 (+)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
K6T44_RS07325 (K6T44_07320)	gdhA	1564396..1565754 (+)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
K6T44_RS07330 (K6T44_07325)	-	1565886..1566536 (+)	651	WP_004918082.1	HD domain-containing protein	-
K6T44_RS07335 (K6T44_07330)	-	1566591..1567142 (+)	552	WP_004918080.1	hypothetical protein	-
K6T44_RS07345 (K6T44_07340)	comF	1567364..1568017 (+)	654	WP_004918078.1	ComF family protein	Machinery gene
K6T44_RS07350 (K6T44_07345)	-	1568105..1568245 (-)	141	WP_015345427.1	hypothetical protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=598510 K6T44_RS07320 WP_004918085.1 1563109..1564212(+) (dprA) [Riemerella anatipestifer strain 20190609E1-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=598510 K6T44_RS07320 WP_004918085.1 1563109..1564212(+) (dprA) [Riemerella anatipestifer strain 20190609E1-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1