Detailed information NTG0598428

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6T48_RS04145
• Genome accession: NZ_CP081929
• Coordinates: 893236..894339 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190213Y1-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 888236..899339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T48_RS04115 (K6T48_04115)	-	889203..889343 (+)	141	WP_015345427.1	hypothetical protein	-
K6T48_RS04120 (K6T48_04120)	comF	889431..890084 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
K6T48_RS04130 (K6T48_04130)	-	890306..890857 (-)	552	WP_004918080.1	hypothetical protein	-
K6T48_RS04135 (K6T48_04135)	-	890912..891562 (-)	651	WP_004918082.1	HD domain-containing protein	-
K6T48_RS04140 (K6T48_04140)	gdhA	891694..893052 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
K6T48_RS04145 (K6T48_04145)	dprA	893236..894339 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
K6T48_RS04150 (K6T48_04150)	-	894342..894719 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
K6T48_RS04155 (K6T48_04155)	ruvC	894730..895284 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
K6T48_RS04160 (K6T48_04160)	-	895308..896498 (-)	1191	WP_065189192.1	carboxypeptidase-like regulatory domain-containing protein	-
K6T48_RS04165 (K6T48_04165)	-	896528..897001 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=598428 K6T48_RS04145 WP_004918085.1 893236..894339(-) (dprA) [Riemerella anatipestifer strain 20190213Y1-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=598428 K6T48_RS04145 WP_004918085.1 893236..894339(-) (dprA) [Riemerella anatipestifer strain 20190213Y1-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1