Detailed information NTG0598403

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6T46_RS03975
• Genome accession: NZ_CP081928
• Coordinates: 857058..858161 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain 20190510E1-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 852058..863161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T46_RS03945 (K6T46_03945)	-	853025..853165 (+)	141	WP_015345427.1	hypothetical protein	-
K6T46_RS03950 (K6T46_03950)	comF	853253..853906 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
K6T46_RS03960 (K6T46_03960)	-	854128..854679 (-)	552	WP_004918080.1	hypothetical protein	-
K6T46_RS03965 (K6T46_03965)	-	854734..855384 (-)	651	WP_004918082.1	HD domain-containing protein	-
K6T46_RS03970 (K6T46_03970)	gdhA	855516..856874 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
K6T46_RS03975 (K6T46_03975)	dprA	857058..858161 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
K6T46_RS03980 (K6T46_03980)	-	858164..858541 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
K6T46_RS03985 (K6T46_03985)	ruvC	858552..859106 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
K6T46_RS03990 (K6T46_03990)	-	859130..860320 (-)	1191	WP_004918090.1	carboxypeptidase-like regulatory domain-containing protein	-
K6T46_RS03995 (K6T46_03995)	-	860350..860823 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=598403 K6T46_RS03975 WP_004918085.1 857058..858161(-) (dprA) [Riemerella anatipestifer strain 20190510E1-1]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=598403 K6T46_RS03975 WP_004918085.1 857058..858161(-) (dprA) [Riemerella anatipestifer strain 20190510E1-1]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1