Detailed information NTG0598289

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NBY15_RS23480
• Genome accession: NZ_CP098214
• Coordinates: 4843933..4844958 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z0117EC0036
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4838933..4849958

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBY15_RS23460 (NBY15_23455)	metJ	4840118..4840435 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NBY15_RS23465 (NBY15_23460)	yiiX	4840495..4841103 (+)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
NBY15_RS23470 (NBY15_23465)	rpmE	4841164..4841376 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NBY15_RS23475 (NBY15_23470)	priA	4841579..4843777 (+)	2199	WP_021521149.1	primosomal protein N'	Machinery gene
NBY15_RS23480 (NBY15_23475)	cytR	4843933..4844958 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
NBY15_RS23485 (NBY15_23480)	ftsN	4845050..4846009 (+)	960	WP_000068846.1	cell division protein FtsN	-
NBY15_RS23490 (NBY15_23485)	hslV	4846102..4846632 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
NBY15_RS23495 (NBY15_23490)	hslU	4846642..4847973 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NBY15_RS23500 (NBY15_23495)	menA	4848040..4848966 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NBY15_RS23505 (NBY15_23500)	rraA	4849059..4849544 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NBY15_RS23510 (NBY15_23505)	zapB	4849629..4849874 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=598289 NBY15_RS23480 WP_000644911.1 4843933..4844958(+) (cytR) [Escherichia coli strain Z0117EC0036]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=598289 NBY15_RS23480 WP_000644911.1 4843933..4844958(+) (cytR) [Escherichia coli strain Z0117EC0036]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625