Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   K6T24_RS20290 Genome accession   NZ_CP081872
Coordinates   4016558..4017352 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain UTDF19-29B     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4011558..4022352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6T24_RS20255 (K6T24_20165) - 4012096..4013190 (+) 1095 WP_070173762.1 Rap family tetratricopeptide repeat protein -
  K6T24_RS20260 (K6T24_20170) - 4013190..4013444 (+) 255 WP_000734398.1 hypothetical protein -
  K6T24_RS20265 (K6T24_20175) - 4013760..4014119 (-) 360 WP_085450662.1 hypothetical protein -
  K6T24_RS20270 - 4015084..4015221 (+) 138 Protein_3955 recombinase family protein -
  K6T24_RS20275 (K6T24_20180) - 4015534..4016052 (-) 519 WP_085450663.1 hypothetical protein -
  K6T24_RS20280 (K6T24_20185) - 4016056..4016196 (-) 141 WP_176220233.1 hypothetical protein -
  K6T24_RS20285 (K6T24_20190) - 4016186..4016392 (-) 207 WP_085450664.1 site-specific integrase -
  K6T24_RS20290 (K6T24_20195) spo0A 4016558..4017352 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  K6T24_RS20295 (K6T24_20200) spoIVB 4017641..4018939 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  K6T24_RS20300 (K6T24_20205) recN 4019058..4020797 (-) 1740 WP_000947736.1 DNA repair protein RecN Machinery gene
  K6T24_RS20305 (K6T24_20210) argR 4021059..4021508 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=597975 K6T24_RS20290 WP_000411416.1 4016558..4017352(-) (spo0A) [Bacillus toyonensis strain UTDF19-29B]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=597975 K6T24_RS20290 WP_000411416.1 4016558..4017352(-) (spo0A) [Bacillus toyonensis strain UTDF19-29B]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGGTACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814