Detailed information NTG0597935

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: K6T23_RS18850
• Genome accession: NZ_CP081870
• Coordinates: 3606646..3607962 (-)
• Length: 438 a.a.
• NCBI ID: WP_238282605.1
• Uniprot ID: -
• Organism: Rossellomorea marisflavi strain UTDF19-31A
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3601646..3612962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6T23_RS18820 (K6T23_18840)	flgL	3602122..3603027 (-)	906	WP_238282585.1	flagellar hook-associated protein FlgL	-
K6T23_RS18825 (K6T23_18845)	flgK	3603043..3604620 (-)	1578	WP_238282587.1	flagellar hook-associated protein FlgK	-
K6T23_RS18830 (K6T23_18850)	-	3604642..3605139 (-)	498	WP_238282588.1	flagellar protein FlgN	-
K6T23_RS18835 (K6T23_18855)	flgM	3605157..3605423 (-)	267	WP_238282600.1	flagellar biosynthesis anti-sigma factor FlgM	-
K6T23_RS18840 (K6T23_18860)	-	3605512..3605925 (-)	414	WP_238282602.1	TIGR03826 family flagellar region protein	-
K6T23_RS18845 (K6T23_18865)	-	3605985..3606656 (-)	672	WP_238282604.1	ComF family protein	-
K6T23_RS18850 (K6T23_18870)	comFA	3606646..3607962 (-)	1317	WP_238282605.1	DEAD/DEAH box helicase	Machinery gene
K6T23_RS18855 (K6T23_18875)	-	3608229..3609137 (-)	909	WP_238282607.1	S66 peptidase family protein	-
K6T23_RS18860 (K6T23_18880)	-	3609560..3610411 (-)	852	WP_048006620.1	DegV family protein	-
K6T23_RS18865 (K6T23_18885)	-	3610563..3611480 (-)	918	WP_238282609.1	DMT family transporter	-

Sequence

Protein

• Length: 438 a.a.
• Molecular weight: 49022.59 Da
• Isoelectric Point: 8.7805

>NTDB_id=597935 K6T23_RS18850 WP_238282605.1 3606646..3607962(-) (comFA) [Rossellomorea marisflavi strain UTDF19-31A]
MDEVPCDGTLVHEHYLHGYVSYGPGVQAGICQRCGNGSRGRFGEFECARCGKLCRYCRNCLMMGRVSECTPLLTWNGPPP
RVKNDAPFAWEGTLSPAQQEASTELVTAVKENRDLLVWAVCGAGKTEVLFEGIHEALRSGKRVCLATPRTDVILELSPRL
KKVFPKTDLITLYGGSEERQLYGQIVLTTTHQLFRFKGAFDVMIVDEVDAFPYSFDSSLQFAVEKARKPSSSLVHLTATP
DAATQRECRMGRRNHFRIPARFHRHPIPSPRFAWCGNWQKSLEKGKIPPPLKKWTLQRLHTSTPALIFFPSVAIMNKALP
LFQAIHPLIESVHAEDPERKEKVMKMRKFEMPILLTTTILERGVTIPGIDVAVLGSEETIFTESALVQISGRVGRSSDQP
NGDIVYFHHGKTGEMIKARTHINDMNREAGKRGLIDAT

Nucleotide

• Length: 1317 bp

>NTDB_id=597935 K6T23_RS18850 WP_238282605.1 3606646..3607962(-) (comFA) [Rossellomorea marisflavi strain UTDF19-31A]
ATGGATGAGGTACCGTGTGATGGGACGCTCGTTCATGAGCATTATCTACATGGCTACGTCTCATACGGTCCTGGTGTGCA
GGCTGGAATTTGTCAGCGCTGCGGGAACGGTTCGCGCGGCCGTTTTGGTGAGTTTGAATGCGCCCGCTGCGGGAAGTTAT
GCCGCTATTGCCGGAACTGTCTGATGATGGGGAGGGTGTCCGAGTGTACGCCCCTTCTGACTTGGAATGGCCCGCCTCCC
CGTGTGAAAAATGATGCGCCTTTTGCATGGGAGGGGACGCTGTCTCCTGCGCAACAGGAGGCATCCACCGAACTCGTTAC
AGCTGTGAAAGAAAATCGGGATCTTCTGGTATGGGCCGTGTGCGGTGCTGGTAAGACGGAGGTACTGTTCGAGGGAATCC
ATGAGGCTCTCAGGAGCGGTAAGCGCGTCTGTCTCGCCACTCCTAGGACCGATGTCATCCTGGAGCTTTCTCCTCGCTTG
AAAAAAGTGTTTCCCAAGACCGATCTGATCACACTCTACGGTGGTTCCGAGGAACGCCAGTTATACGGGCAAATTGTGCT
GACCACCACGCATCAGCTGTTCCGGTTCAAGGGAGCATTCGATGTCATGATCGTCGACGAGGTCGATGCCTTTCCCTATT
CTTTCGATTCATCCCTTCAGTTCGCCGTGGAGAAAGCAAGAAAACCATCTTCCTCCCTCGTCCATCTCACGGCAACGCCA
GATGCAGCAACGCAGCGGGAGTGCCGCATGGGACGGCGGAATCATTTCCGGATCCCGGCGCGCTTTCATCGTCACCCCAT
TCCATCCCCGCGCTTTGCCTGGTGTGGTAACTGGCAGAAATCGTTGGAAAAAGGAAAGATCCCTCCGCCACTGAAGAAGT
GGACGCTACAAAGATTGCATACCTCAACCCCTGCCCTCATCTTTTTCCCCAGCGTAGCCATCATGAACAAAGCCCTTCCA
TTGTTCCAAGCCATTCACCCCCTGATCGAGTCCGTTCATGCCGAGGATCCTGAACGAAAGGAGAAGGTCATGAAGATGCG
TAAGTTCGAGATGCCGATTCTTCTTACCACGACGATCCTCGAACGGGGAGTCACTATTCCCGGCATTGATGTCGCGGTCC
TCGGGTCCGAGGAAACCATCTTTACCGAGAGTGCCCTTGTGCAAATCTCTGGCAGGGTGGGGAGGAGTTCCGATCAGCCG
AACGGGGACATTGTGTACTTTCACCACGGCAAGACCGGCGAGATGATCAAAGCACGCACCCATATTAATGATATGAACAG
GGAAGCCGGGAAAAGGGGGCTCATCGATGCCACGTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (301-396)

• Type III restriction enzyme, res subunit (ResIII) (94-241)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	48.73	98.858	0.482