Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BJAB0715_RS17680 | Genome accession | NC_021733 |
| Coordinates | 3672414..3672863 (-) | Length | 149 a.a. |
| NCBI ID | WP_020753494.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii BJAB0715 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3667414..3677863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJAB0715_RS17655 (BJAB0715_03532) | - | 3667781..3668164 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| BJAB0715_RS17660 (BJAB0715_03533) | - | 3668374..3668568 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| BJAB0715_RS17665 (BJAB0715_03534) | bfr | 3668813..3669277 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| BJAB0715_RS17670 (BJAB0715_03535) | - | 3669318..3670946 (-) | 1629 | WP_001195768.1 | O-antigen ligase family protein | - |
| BJAB0715_RS17675 (BJAB0715_03536) | - | 3671053..3672363 (-) | 1311 | WP_020753493.1 | O-antigen ligase family protein | - |
| BJAB0715_RS17680 (BJAB0715_03537) | pilA | 3672414..3672863 (-) | 450 | WP_020753494.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BJAB0715_RS17685 (BJAB0715_03538) | - | 3673205..3673765 (-) | 561 | WP_020753495.1 | TPM domain-containing protein | - |
| BJAB0715_RS17690 (BJAB0715_03539) | - | 3673759..3674841 (-) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| BJAB0715_RS17695 (BJAB0715_03540) | - | 3674863..3675453 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| BJAB0715_RS17700 (BJAB0715_03541) | - | 3675585..3676472 (-) | 888 | WP_001017323.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15140.23 Da Isoelectric Point: 8.4527
>NTDB_id=59782 BJAB0715_RS17680 WP_020753494.1 3672414..3672863(-) (pilA) [Acinetobacter baumannii BJAB0715]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQSYIAKSQASEAFTLADGLKTTIATNLQAGTCFANGSAAATATDSVTGKY
GKAEILADTTSGSNGCGIKYTFNASNVSAKLKNGVIGIAVSENGVLKKSTVTATTSTLNEYLPQSFSGS
Nucleotide
Download Length: 450 bp
>NTDB_id=59782 BJAB0715_RS17680 WP_020753494.1 3672414..3672863(-) (pilA) [Acinetobacter baumannii BJAB0715]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTCATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAGTTATATTGCAAAATCTCAAGCTTCTGAAGCATTTACATTAGCAGATGGTCTAAAAACAACTATTG
CTACTAACTTGCAAGCTGGAACATGTTTCGCTAATGGTTCAGCTGCAGCAACAGCAACTGATTCAGTTACGGGTAAATAT
GGTAAAGCAGAAATTTTAGCAGATACAACGTCTGGTAGTAATGGATGTGGTATTAAATATACATTTAATGCATCAAATGT
ATCTGCTAAATTGAAAAACGGAGTTATTGGTATTGCTGTAAGTGAAAATGGTGTATTGAAGAAATCTACAGTAACAGCCA
CAACTTCTACATTAAATGAATATTTACCACAATCTTTCTCTGGTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
67.785 |
100 |
0.678 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae strain A1552 |
40 |
100 |
0.403 |
| pilA | Vibrio cholerae C6706 |
40 |
100 |
0.403 |