Detailed information NTG0059782

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J64_RS02560
• Genome accession: NZ_AP018775
• Coordinates: 507441..508439 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain CHBN-III-4 isolate 12H35
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 502441..513439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J64_RS02535 (CHBNIII4_04840)	tehA	503416..504360 (+)	945	WP_005669396.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J64_RS02540 (CHBNIII4_04850)	tsaA	504413..505132 (-)	720	WP_005664509.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J64_RS02545 (CHBNIII4_04860)	menA	505194..506105 (+)	912	WP_005664512.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J64_RS02550 (CHBNIII4_04870)	rraA	506157..506645 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
K6J64_RS02555 (CHBNIII4_04880)	-	506785..507336 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J64_RS02560 (CHBNIII4_04890)	cytR	507441..508439 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
K6J64_RS02565 (CHBNIII4_04900)	rbsK	508467..509390 (-)	924	WP_014550382.1	ribokinase	-
K6J64_RS02570 (CHBNIII4_04910)	rbsB	509488..510366 (-)	879	WP_005686988.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J64_RS02575 (CHBNIII4_04920)	rbsC	510386..511354 (-)	969	WP_005686986.1	ribose ABC transporter permease	-
K6J64_RS02580 (CHBNIII4_04930)	rbsA	511370..512851 (-)	1482	WP_014550384.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J64_RS02585 (CHBNIII4_04940)	rbsD	512865..513284 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=59782 K6J64_RS02560 WP_005686992.1 507441..508439(-) (cytR) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59782 K6J64_RS02560 WP_005686992.1 507441..508439(-) (cytR) [Haemophilus influenzae strain CHBN-III-4 isolate 12H35]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCTTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATATCAAGCTATTCAACAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCA
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361