Detailed information NTG0059766

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BJAB0715_RS08980
• Genome accession: NC_021733
• Coordinates: 1880213..1880914 (+)
• Length: 233 a.a.
• NCBI ID: WP_020753089.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii BJAB0715
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1875213..1885914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJAB0715_RS08945 (BJAB0715_01788)	kdsB	1875736..1876497 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BJAB0715_RS08950 (BJAB0715_01789)	-	1876509..1877489 (+)	981	WP_038346636.1	DNA polymerase III subunit delta'	-
BJAB0715_RS08955 (BJAB0715_01790)	-	1877501..1877842 (+)	342	WP_020753088.1	PilZ domain-containing protein	-
BJAB0715_RS08960 (BJAB0715_01791)	-	1877860..1878633 (+)	774	WP_000497298.1	TatD family hydrolase	-
BJAB0715_RS08965 (BJAB0715_01792)	-	1878671..1879279 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BJAB0715_RS08970 (BJAB0715_01793)	-	1879289..1879843 (+)	555	WP_000841373.1	type II secretion system protein	-
BJAB0715_RS08975 (BJAB0715_01794)	xcpV	1879833..1880213 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BJAB0715_RS08980 (BJAB0715_01795)	xcpW	1880213..1880914 (+)	702	WP_020753089.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BJAB0715_RS08985 (BJAB0715_01796)	gspK	1880914..1881873 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
BJAB0715_RS08990 (BJAB0715_01797)	-	1882103..1882699 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
BJAB0715_RS08995 (BJAB0715_01798)	ung	1882750..1883463 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
BJAB0715_RS09000 (BJAB0715_01799)	-	1883460..1884584 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BJAB0715_RS09005 (BJAB0715_01800)	tadA	1884591..1885094 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
BJAB0715_RS09010 (BJAB0715_01801)	-	1885164..1885607 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26599.56 Da
• Isoelectric Point: 9.5501

>NTDB_id=59766 BJAB0715_RS08980 WP_020753089.1 1880213..1880914(+) (xcpW) [Acinetobacter baumannii BJAB0715]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=59766 BJAB0715_RS08980 WP_020753089.1 1880213..1880914(+) (xcpW) [Acinetobacter baumannii BJAB0715]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987