Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BJAB0715_RS08975 | Genome accession | NC_021733 |
| Coordinates | 1879833..1880213 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii BJAB0715 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1874833..1885213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJAB0715_RS08945 (BJAB0715_01788) | kdsB | 1875736..1876497 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BJAB0715_RS08950 (BJAB0715_01789) | - | 1876509..1877489 (+) | 981 | WP_038346636.1 | DNA polymerase III subunit delta' | - |
| BJAB0715_RS08955 (BJAB0715_01790) | - | 1877501..1877842 (+) | 342 | WP_020753088.1 | PilZ domain-containing protein | - |
| BJAB0715_RS08960 (BJAB0715_01791) | - | 1877860..1878633 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BJAB0715_RS08965 (BJAB0715_01792) | - | 1878671..1879279 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BJAB0715_RS08970 (BJAB0715_01793) | - | 1879289..1879843 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BJAB0715_RS08975 (BJAB0715_01794) | xcpV | 1879833..1880213 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BJAB0715_RS08980 (BJAB0715_01795) | xcpW | 1880213..1880914 (+) | 702 | WP_020753089.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BJAB0715_RS08985 (BJAB0715_01796) | gspK | 1880914..1881873 (+) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| BJAB0715_RS08990 (BJAB0715_01797) | - | 1882103..1882699 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| BJAB0715_RS08995 (BJAB0715_01798) | ung | 1882750..1883463 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| BJAB0715_RS09000 (BJAB0715_01799) | - | 1883460..1884584 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BJAB0715_RS09005 (BJAB0715_01800) | tadA | 1884591..1885094 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=59765 BJAB0715_RS08975 WP_000836911.1 1879833..1880213(+) (xcpV) [Acinetobacter baumannii BJAB0715]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=59765 BJAB0715_RS08975 WP_000836911.1 1879833..1880213(+) (xcpV) [Acinetobacter baumannii BJAB0715]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |