Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K5O16_RS03775 Genome accession   NZ_CP081816
Coordinates   556873..557469 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain AR8416     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 551873..562469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K5O16_RS03760 helD 552081..554135 (-) 2055 WP_004224033.1 DNA helicase IV -
  K5O16_RS03765 - 554260..554706 (+) 447 WP_004224032.1 YccF domain-containing protein -
  K5O16_RS03770 yccS 554724..556859 (+) 2136 WP_002898422.1 YccS family putative transporter -
  K5O16_RS03775 sxy/tfoX 556873..557469 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  K5O16_RS03780 sulA 557818..558327 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  K5O16_RS03785 ompA 558680..559750 (+) 1071 WP_002898408.1 porin OmpA -
  K5O16_RS03790 matP 559881..560333 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  K5O16_RS03795 - 560519..562276 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=597515 K5O16_RS03775 WP_004179217.1 556873..557469(-) (sxy/tfoX) [Klebsiella pneumoniae strain AR8416]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=597515 K5O16_RS03775 WP_004179217.1 556873..557469(-) (sxy/tfoX) [Klebsiella pneumoniae strain AR8416]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51