Detailed information NTG0597469

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NBY25_RS01315
• Genome accession: NZ_CP098187
• Coordinates: 249717..250742 (-)
• Length: 341 a.a.
• NCBI ID: WP_250781968.1
• Uniprot ID: -
• Organism: Escherichia coli strain Z0117EC0117
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 244717..255742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NBY25_RS01285 (NBY25_01285)	zapB	244801..245046 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
NBY25_RS01290 (NBY25_01290)	rraA	245131..245616 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NBY25_RS01295 (NBY25_01295)	menA	245709..246635 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NBY25_RS01300 (NBY25_01300)	hslU	246702..248033 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NBY25_RS01305 (NBY25_01305)	hslV	248043..248573 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NBY25_RS01310 (NBY25_01310)	ftsN	248666..249625 (-)	960	WP_000068834.1	cell division protein FtsN	-
NBY25_RS01315 (NBY25_01315)	cytR	249717..250742 (-)	1026	WP_250781968.1	DNA-binding transcriptional regulator CytR	Regulator
NBY25_RS01320 (NBY25_01320)	priA	250898..253096 (-)	2199	WP_001468126.1	primosomal protein N'	Machinery gene
NBY25_RS01325 (NBY25_01325)	rpmE	253299..253511 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
NBY25_RS01330 (NBY25_01330)	yiiX	253572..254180 (-)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
NBY25_RS01335 (NBY25_01335)	metJ	254240..254557 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37833.77 Da
• Isoelectric Point: 6.1617

>NTDB_id=597469 NBY25_RS01315 WP_250781968.1 249717..250742(-) (cytR) [Escherichia coli strain Z0117EC0117]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIVRGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=597469 NBY25_RS01315 WP_250781968.1 249717..250742(-) (cytR) [Escherichia coli strain Z0117EC0117]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGTCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.138	95.894	0.625