Detailed information NTG0059720

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J70_RS02555
• Genome accession: NZ_AP018774
• Coordinates: 512777..513775 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain CHBN-III-3 isolate 13H42
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 507777..518775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J70_RS02530 (CHBNIII3_04820)	tehA	508753..509697 (+)	945	WP_011961658.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J70_RS02535 (CHBNIII3_04830)	tsaA	509752..510471 (-)	720	WP_005686995.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J70_RS02540 (CHBNIII3_04840)	menA	510533..511444 (+)	912	WP_005686994.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J70_RS02545 (CHBNIII3_04850)	rraA	511496..511984 (+)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
K6J70_RS02550 (CHBNIII3_04860)	-	512119..512670 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J70_RS02555 (CHBNIII3_04870)	cytR	512777..513775 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
K6J70_RS02560 (CHBNIII3_04880)	rbsK	513802..514722 (-)	921	WP_005686990.1	ribokinase	-
K6J70_RS02565 (CHBNIII3_04890)	rbsB	514820..515698 (-)	879	WP_011961659.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J70_RS02570 (CHBNIII3_04900)	rbsC	515718..516686 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J70_RS02575 (CHBNIII3_04910)	rbsA	516702..518183 (-)	1482	WP_011961660.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J70_RS02580 (CHBNIII3_04920)	rbsD	518197..518616 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=59720 K6J70_RS02555 WP_005686992.1 512777..513775(-) (cytR) [Haemophilus influenzae strain CHBN-III-3 isolate 13H42]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59720 K6J70_RS02555 WP_005686992.1 512777..513775(-) (cytR) [Haemophilus influenzae strain CHBN-III-3 isolate 13H42]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361