Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BJAB0868_RS08640 | Genome accession | NC_021729 |
| Coordinates | 1816410..1816790 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii BJAB0868 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1811410..1821790
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJAB0868_RS08610 (BJAB0868_01727) | kdsB | 1812313..1813074 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BJAB0868_RS08615 (BJAB0868_01728) | - | 1813086..1814066 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BJAB0868_RS08620 (BJAB0868_01729) | - | 1814078..1814419 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BJAB0868_RS08625 (BJAB0868_01730) | - | 1814437..1815210 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BJAB0868_RS08630 (BJAB0868_01731) | - | 1815248..1815856 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BJAB0868_RS08635 (BJAB0868_01732) | - | 1815866..1816420 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BJAB0868_RS08640 (BJAB0868_01733) | xcpV | 1816410..1816790 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BJAB0868_RS08645 (BJAB0868_01734) | xcpW | 1816790..1817491 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BJAB0868_RS08650 (BJAB0868_01735) | gspK | 1817491..1818450 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| BJAB0868_RS08655 (BJAB0868_01736) | - | 1818681..1819277 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| BJAB0868_RS08660 (BJAB0868_01737) | ung | 1819328..1820041 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BJAB0868_RS08665 (BJAB0868_01738) | - | 1820038..1821162 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BJAB0868_RS08670 (BJAB0868_01739) | tadA | 1821169..1821672 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=59717 BJAB0868_RS08640 WP_000836911.1 1816410..1816790(+) (xcpV) [Acinetobacter baumannii BJAB0868]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=59717 BJAB0868_RS08640 WP_000836911.1 1816410..1816790(+) (xcpV) [Acinetobacter baumannii BJAB0868]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |