Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | K5J94_RS08585 | Genome accession | NZ_CP081502 |
| Coordinates | 1834524..1836785 (+) | Length | 753 a.a. |
| NCBI ID | WP_159563965.1 | Uniprot ID | - |
| Organism | Streptococcus halichoeri strain Shali_VAS-CPH | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1829524..1841785
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5J94_RS08555 | - | 1829538..1830365 (-) | 828 | WP_221912938.1 | TlyA family RNA methyltransferase | - |
| K5J94_RS08560 | - | 1830358..1831230 (-) | 873 | WP_221912939.1 | polyprenyl synthetase family protein | - |
| K5J94_RS08565 | - | 1831230..1831445 (-) | 216 | WP_159543646.1 | exodeoxyribonuclease VII small subunit | - |
| K5J94_RS08570 | xseA | 1831423..1832763 (-) | 1341 | WP_221912942.1 | exodeoxyribonuclease VII large subunit | - |
| K5J94_RS08575 | - | 1832950..1833807 (-) | 858 | WP_159564002.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| K5J94_RS08580 | - | 1834003..1834233 (-) | 231 | WP_159543642.1 | YkuJ family protein | - |
| K5J94_RS08585 | clpE | 1834524..1836785 (+) | 2262 | WP_159563965.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| K5J94_RS08590 | - | 1836908..1837354 (+) | 447 | WP_159543638.1 | NUDIX hydrolase | - |
| K5J94_RS08595 | - | 1837410..1837724 (+) | 315 | WP_159543636.1 | DUF1827 family protein | - |
| K5J94_RS08600 | ileS | 1837971..1840763 (-) | 2793 | WP_221912944.1 | isoleucine--tRNA ligase | - |
| K5J94_RS08605 | - | 1840993..1841775 (-) | 783 | WP_159543632.1 | DivIVA domain-containing protein | - |
Sequence
Protein
Download Length: 753 a.a. Molecular weight: 84081.42 Da Isoelectric Point: 5.2690
>NTDB_id=597078 K5J94_RS08585 WP_159563965.1 1834524..1836785(+) (clpE) [Streptococcus halichoeri strain Shali_VAS-CPH]
MLCQNCNLNEASIHLYTNVNGKQRQIDLCQNCYQIMKTDPQNSLLGNQKQGTLSDSIKPLFEDFMDDLNNFQPFSKLPNS
PRSEQDNLSNDPNSRNNRMSGQATRRQDPQAPQGLLDEFGIDVTDIASRGGIDPVIGRDDEIRRVIEILNRRTKNNPVLI
GEPGVGKTAVVEGLAQKIIDGDVPHKLQGKHVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRKDVILFIDEIHEIVGA
GNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVNEPSVDETITILKGIQKKYEEYHHVQYS
DDAILAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQKLVDAENQKALATRQEDFERAAYFRDQILKL
KEMQKQEVTDQDIPLITEKTIEAIVEEKTNIPVGDLKAKEQSQLIHLADDLKSHVIGQDAAVEKIAKAIRRNRVGLGSLN
RPIGSFLFVGPTGVGKTELSKQLAIELFGSDENMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLIL
LDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGNAEASVGFGAAREGRTNSVLGQLGNFFSPEFM
NRFDAIVEFAALSKPDLLKIVDLMLVNVNDRLGRNGLHLDVTTKVKEKLVELGYDPKMGARPLRRTIQEHIEDAITDYYL
EHPTEKNLRAMMTSNGHIAIKANQSEEAAQPSH
MLCQNCNLNEASIHLYTNVNGKQRQIDLCQNCYQIMKTDPQNSLLGNQKQGTLSDSIKPLFEDFMDDLNNFQPFSKLPNS
PRSEQDNLSNDPNSRNNRMSGQATRRQDPQAPQGLLDEFGIDVTDIASRGGIDPVIGRDDEIRRVIEILNRRTKNNPVLI
GEPGVGKTAVVEGLAQKIIDGDVPHKLQGKHVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRKDVILFIDEIHEIVGA
GNAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVNEPSVDETITILKGIQKKYEEYHHVQYS
DDAILAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQKLVDAENQKALATRQEDFERAAYFRDQILKL
KEMQKQEVTDQDIPLITEKTIEAIVEEKTNIPVGDLKAKEQSQLIHLADDLKSHVIGQDAAVEKIAKAIRRNRVGLGSLN
RPIGSFLFVGPTGVGKTELSKQLAIELFGSDENMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLIL
LDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGNAEASVGFGAAREGRTNSVLGQLGNFFSPEFM
NRFDAIVEFAALSKPDLLKIVDLMLVNVNDRLGRNGLHLDVTTKVKEKLVELGYDPKMGARPLRRTIQEHIEDAITDYYL
EHPTEKNLRAMMTSNGHIAIKANQSEEAAQPSH
Nucleotide
Download Length: 2262 bp
>NTDB_id=597078 K5J94_RS08585 WP_159563965.1 1834524..1836785(+) (clpE) [Streptococcus halichoeri strain Shali_VAS-CPH]
ATGCTTTGTCAAAATTGTAACTTAAACGAAGCCTCTATTCACCTATATACTAATGTGAACGGCAAACAACGCCAAATTGA
CCTTTGTCAAAATTGTTATCAAATTATGAAGACAGATCCCCAAAATAGCTTATTGGGCAATCAAAAACAAGGTACCCTTT
CTGACTCTATTAAACCACTTTTTGAAGACTTTATGGATGATTTAAATAATTTCCAACCGTTTAGTAAACTTCCAAATAGT
CCACGCTCAGAACAAGATAATCTCTCAAATGATCCAAACAGCCGAAATAACCGCATGTCTGGACAAGCGACCCGCCGTCA
AGATCCGCAAGCTCCTCAAGGACTCTTAGATGAATTTGGTATTGATGTGACCGATATTGCCAGTCGTGGCGGCATTGACC
CTGTCATTGGGCGCGATGATGAGATTCGCCGCGTGATTGAAATTCTGAACCGGCGAACAAAAAATAATCCCGTCCTGATT
GGTGAGCCAGGTGTTGGTAAAACAGCTGTTGTAGAAGGCCTAGCTCAAAAAATTATTGATGGCGATGTTCCGCATAAACT
GCAAGGAAAACATGTCATTCGTTTAGATGTGGTCAGCTTGGTCCAAGGTACTGGTATCCGCGGTCAATTTGAAGAGCGCA
TGCAAAAGCTCATGGAAGAAATTCGTAACCGCAAAGACGTCATCTTATTTATTGATGAAATCCATGAAATTGTCGGCGCT
GGCAATGCAGGCGATGGTAACATGGATGCTGGTAATATCTTAAAACCAGCTCTGGCACGTGGTGAACTCCAATTAGTGGG
CGCTACCACTCTCAACGAATATCGGATTATTGAAAAAGACGCTGCCCTAGAGCGGCGGATGCAACCTGTTAAAGTCAATG
AACCTTCTGTTGATGAAACCATTACTATCTTAAAGGGTATTCAAAAGAAATACGAAGAATACCACCATGTTCAATATAGC
GATGATGCTATTTTAGCTGCGGCTCATCTCTCGAATCGCTATATCCAAGACCGATTCTTACCAGACAAGGCCATTGACCT
GCTGGATGAAGCAGGCTCAAAAATGAATCTAACACTTAATTTCGTTGATCCAAAAGAAATTGATCAAAAGCTAGTAGACG
CTGAAAATCAAAAAGCGCTAGCTACCCGTCAAGAAGACTTTGAACGCGCAGCTTATTTCCGTGACCAAATCCTCAAACTA
AAAGAAATGCAAAAACAAGAGGTCACAGACCAAGATATTCCTTTGATTACTGAAAAAACCATTGAAGCAATCGTAGAGGA
AAAAACGAATATCCCAGTTGGCGACTTAAAAGCAAAAGAACAGTCACAATTGATTCACTTGGCTGATGATCTTAAGAGCC
ATGTCATTGGCCAAGATGCAGCCGTGGAAAAAATCGCCAAGGCCATTCGGCGTAACCGGGTCGGCTTAGGCAGCCTCAAT
CGACCAATCGGCTCCTTCTTGTTTGTAGGACCAACCGGTGTAGGAAAGACCGAGCTTTCTAAGCAATTAGCTATTGAATT
ATTTGGCTCTGACGAAAATATGATTCGTTTTGATATGTCTGAATACATGGAAAAACATGCCGTATCCAAATTGGTCGGAG
CACCTCCAGGCTATGTTGGTTATGATGAGGCTGGTCAACTAACTGAAAAAGTTCGTCGTAATCCCTACTCGCTCATTCTT
CTTGACGAAGTCGAAAAGGCCCATCCAGATGTGATGCATATGTTTCTTCAAGTACTTGATGATGGTCGCCTCACTGATGG
TCAAGGGCGCACAGTTAGCTTTAAAGATACCATTATTATCATGACCTCAAATGCTGGAACAGGCAATGCTGAAGCGTCGG
TTGGTTTTGGTGCTGCGCGCGAAGGTCGGACCAATTCGGTACTGGGACAACTAGGTAACTTCTTTAGCCCTGAATTTATG
AACCGTTTTGATGCCATTGTTGAATTCGCTGCACTCTCTAAACCAGACCTTCTTAAAATTGTTGATCTAATGCTAGTCAA
TGTCAATGATCGGCTTGGACGCAACGGTCTCCACCTTGATGTCACTACCAAAGTTAAAGAAAAATTGGTAGAGCTTGGTT
ATGATCCAAAAATGGGGGCACGGCCCTTACGTCGCACCATCCAAGAGCATATTGAAGATGCTATTACCGATTATTACCTT
GAACACCCAACTGAGAAAAACTTACGTGCCATGATGACAAGTAATGGACACATTGCAATCAAAGCCAATCAAAGCGAAGA
AGCTGCTCAGCCCAGCCATTAA
ATGCTTTGTCAAAATTGTAACTTAAACGAAGCCTCTATTCACCTATATACTAATGTGAACGGCAAACAACGCCAAATTGA
CCTTTGTCAAAATTGTTATCAAATTATGAAGACAGATCCCCAAAATAGCTTATTGGGCAATCAAAAACAAGGTACCCTTT
CTGACTCTATTAAACCACTTTTTGAAGACTTTATGGATGATTTAAATAATTTCCAACCGTTTAGTAAACTTCCAAATAGT
CCACGCTCAGAACAAGATAATCTCTCAAATGATCCAAACAGCCGAAATAACCGCATGTCTGGACAAGCGACCCGCCGTCA
AGATCCGCAAGCTCCTCAAGGACTCTTAGATGAATTTGGTATTGATGTGACCGATATTGCCAGTCGTGGCGGCATTGACC
CTGTCATTGGGCGCGATGATGAGATTCGCCGCGTGATTGAAATTCTGAACCGGCGAACAAAAAATAATCCCGTCCTGATT
GGTGAGCCAGGTGTTGGTAAAACAGCTGTTGTAGAAGGCCTAGCTCAAAAAATTATTGATGGCGATGTTCCGCATAAACT
GCAAGGAAAACATGTCATTCGTTTAGATGTGGTCAGCTTGGTCCAAGGTACTGGTATCCGCGGTCAATTTGAAGAGCGCA
TGCAAAAGCTCATGGAAGAAATTCGTAACCGCAAAGACGTCATCTTATTTATTGATGAAATCCATGAAATTGTCGGCGCT
GGCAATGCAGGCGATGGTAACATGGATGCTGGTAATATCTTAAAACCAGCTCTGGCACGTGGTGAACTCCAATTAGTGGG
CGCTACCACTCTCAACGAATATCGGATTATTGAAAAAGACGCTGCCCTAGAGCGGCGGATGCAACCTGTTAAAGTCAATG
AACCTTCTGTTGATGAAACCATTACTATCTTAAAGGGTATTCAAAAGAAATACGAAGAATACCACCATGTTCAATATAGC
GATGATGCTATTTTAGCTGCGGCTCATCTCTCGAATCGCTATATCCAAGACCGATTCTTACCAGACAAGGCCATTGACCT
GCTGGATGAAGCAGGCTCAAAAATGAATCTAACACTTAATTTCGTTGATCCAAAAGAAATTGATCAAAAGCTAGTAGACG
CTGAAAATCAAAAAGCGCTAGCTACCCGTCAAGAAGACTTTGAACGCGCAGCTTATTTCCGTGACCAAATCCTCAAACTA
AAAGAAATGCAAAAACAAGAGGTCACAGACCAAGATATTCCTTTGATTACTGAAAAAACCATTGAAGCAATCGTAGAGGA
AAAAACGAATATCCCAGTTGGCGACTTAAAAGCAAAAGAACAGTCACAATTGATTCACTTGGCTGATGATCTTAAGAGCC
ATGTCATTGGCCAAGATGCAGCCGTGGAAAAAATCGCCAAGGCCATTCGGCGTAACCGGGTCGGCTTAGGCAGCCTCAAT
CGACCAATCGGCTCCTTCTTGTTTGTAGGACCAACCGGTGTAGGAAAGACCGAGCTTTCTAAGCAATTAGCTATTGAATT
ATTTGGCTCTGACGAAAATATGATTCGTTTTGATATGTCTGAATACATGGAAAAACATGCCGTATCCAAATTGGTCGGAG
CACCTCCAGGCTATGTTGGTTATGATGAGGCTGGTCAACTAACTGAAAAAGTTCGTCGTAATCCCTACTCGCTCATTCTT
CTTGACGAAGTCGAAAAGGCCCATCCAGATGTGATGCATATGTTTCTTCAAGTACTTGATGATGGTCGCCTCACTGATGG
TCAAGGGCGCACAGTTAGCTTTAAAGATACCATTATTATCATGACCTCAAATGCTGGAACAGGCAATGCTGAAGCGTCGG
TTGGTTTTGGTGCTGCGCGCGAAGGTCGGACCAATTCGGTACTGGGACAACTAGGTAACTTCTTTAGCCCTGAATTTATG
AACCGTTTTGATGCCATTGTTGAATTCGCTGCACTCTCTAAACCAGACCTTCTTAAAATTGTTGATCTAATGCTAGTCAA
TGTCAATGATCGGCTTGGACGCAACGGTCTCCACCTTGATGTCACTACCAAAGTTAAAGAAAAATTGGTAGAGCTTGGTT
ATGATCCAAAAATGGGGGCACGGCCCTTACGTCGCACCATCCAAGAGCATATTGAAGATGCTATTACCGATTATTACCTT
GAACACCCAACTGAGAAAAACTTACGTGCCATGATGACAAGTAATGGACACATTGCAATCAAAGCCAATCAAAGCGAAGA
AGCTGCTCAGCCCAGCCATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
80 |
99.602 |
0.797 |
| clpE | Streptococcus pneumoniae Rx1 |
79.545 |
99.336 |
0.79 |
| clpE | Streptococcus pneumoniae D39 |
79.545 |
99.336 |
0.79 |
| clpE | Streptococcus pneumoniae R6 |
79.545 |
99.336 |
0.79 |
| clpE | Streptococcus pneumoniae TIGR4 |
79.545 |
99.336 |
0.79 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
73.844 |
100 |
0.742 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.978 |
84.728 |
0.449 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.401 |
89.509 |
0.406 |
| clpC | Streptococcus pneumoniae Rx1 |
45.859 |
86.587 |
0.397 |
| clpC | Streptococcus pneumoniae D39 |
45.859 |
86.587 |
0.397 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.859 |
86.587 |
0.397 |
| clpC | Streptococcus mutans UA159 |
47.352 |
82.736 |
0.392 |
| clpC | Streptococcus thermophilus LMD-9 |
46.423 |
83.533 |
0.388 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.105 |
83.533 |
0.385 |