Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | K5A08_RS05225 | Genome accession | NZ_CP081480 |
| Coordinates | 1014667..1014969 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain NCTC12658 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1009667..1019969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5A08_RS05200 (K5A08_05200) | rpsR | 1010030..1010290 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| K5A08_RS05205 (K5A08_05205) | lon | 1010350..1012725 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| K5A08_RS05210 (K5A08_05210) | - | 1012742..1013389 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| K5A08_RS05215 (K5A08_05215) | fliW | 1013550..1013939 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| K5A08_RS05220 (K5A08_05220) | proC | 1013939..1014670 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| K5A08_RS05225 (K5A08_05225) | ctsT | 1014667..1014969 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| K5A08_RS05230 (K5A08_05230) | - | 1014966..1015628 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| K5A08_RS05235 (K5A08_05235) | - | 1015625..1016077 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| K5A08_RS05240 (K5A08_05240) | hemD | 1016074..1016703 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| K5A08_RS05245 (K5A08_05245) | thiE | 1016681..1017313 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| K5A08_RS05250 (K5A08_05250) | thiD | 1017303..1018115 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| K5A08_RS05255 (K5A08_05255) | - | 1018112..1018798 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| K5A08_RS05260 (K5A08_05260) | - | 1018795..1019556 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=596767 K5A08_RS05225 WP_002855822.1 1014667..1014969(+) (ctsT) [Campylobacter jejuni strain NCTC12658]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=596767 K5A08_RS05225 WP_002855822.1 1014667..1014969(+) (ctsT) [Campylobacter jejuni strain NCTC12658]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |