Detailed information NTG0596756

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: NAG75_RS02805
• Genome accession: NZ_CP097873
• Coordinates: 426031..428853 (-)
• Length: 940 a.a.
• NCBI ID: WP_005490537.1
• Uniprot ID: Q87LA0
• Organism: Vibrio parahaemolyticus strain GL-601
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 421031..433853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NAG75_RS02795	-	422945..424066 (+)	1122	WP_017449452.1	alanine--glyoxylate aminotransferase family protein	-
NAG75_RS02800	-	424215..425963 (-)	1749	WP_208893474.1	PglL family O-oligosaccharyltransferase	-
NAG75_RS02805	uvrA	426031..428853 (-)	2823	WP_005490537.1	excinuclease ABC subunit UvrA	Machinery gene
NAG75_RS02810	galU	428991..429863 (-)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
NAG75_RS02815	qstR	430121..430765 (-)	645	WP_005480993.1	LuxR C-terminal-related transcriptional regulator	Regulator
NAG75_RS02820	ssb	431044..431574 (+)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
NAG75_RS02825	csrD	431815..433824 (+)	2010	WP_011106082.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103871.11 Da
• Isoelectric Point: 6.5101

>NTDB_id=596756 NAG75_RS02805 WP_005490537.1 426031..428853(-) (uvrA) [Vibrio parahaemolyticus strain GL-601]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=596756 NAG75_RS02805 WP_005490537.1 426031..428853(-) (uvrA) [Vibrio parahaemolyticus strain GL-601]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATTCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGTGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATCGAAGGTTTATCA
CCGGCGATTTCTATTGAACAAAAATCGACATCTCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGCCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTATTGGAACTGCCAGAAGGCAGCAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCTCCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCTGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGGTTGCTCCGATGGATGGCGAT
GGGGAAGAAATCATCTTTTCCGCGAACTTCGCTTGTCCGCAATGTGGCTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAGCCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCTATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCACGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGATACCGAGTCCAACTCGGTTCGAGAAGAGTTGGCTAAATACATC
TCGACAAAATCATGCTCAAGCTGTGGCGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACTACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TCGCAGAAAAGGTCATGAAGGAGATCAATGATCGTCTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTTAATTTATCC
CGGAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTCTTAGATGAACCGTCAATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCGGGAGCGGGGGTACACGGCGGTAATGTGGTTGCCGAAGGAACGATGGATGAGATCATCGCCAACCCGAACTCTCTCAC
AGGTCAATATCTAAGTGGCGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAGC
TACTAGGTGCAACAGGTAACAACCTGAAGAACGTCGACTTGTCTATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCTGGCTCCGGTAAATCAACCTTGATTAACGATACTTTTTTCAAAATTGCACACACCCAGCTCAATGGCGCTACTACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCGCGCTCGAACCCAGCGACATACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAGGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAACGTTCGCGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGTAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCACAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTAGATGAGCCAACAACTGGTCTGCACTTCCATGATATTCAGCAGCTATTGACCGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAACATAACTTGGACGTCATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAAGG
CGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

3D structure

• AlphaFold DB: Q87LA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.749	100	0.579
uvrA	Streptococcus pneumoniae TIGR4	57.749	100	0.579
uvrA	Streptococcus pneumoniae D39	57.749	100	0.579