Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   M9H69_RS05275 Genome accession   NZ_CP097843
Coordinates   1022697..1023767 (-) Length   356 a.a.
NCBI ID   WP_250316141.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1017697..1028767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS05260 (M9H69_05260) - 1018783..1019826 (+) 1044 WP_250316139.1 dihydrolipoamide acetyltransferase -
  M9H69_RS05265 (M9H69_05265) lpdA 1019873..1021576 (+) 1704 WP_250316140.1 dihydrolipoyl dehydrogenase -
  M9H69_RS05270 (M9H69_05270) - 1021635..1022624 (+) 990 WP_061414054.1 lipoate--protein ligase -
  M9H69_RS05275 (M9H69_05275) xerS 1022697..1023767 (-) 1071 WP_250316141.1 tyrosine recombinase XerS Machinery gene
  M9H69_RS05280 (M9H69_05280) - 1023917..1024207 (-) 291 WP_250316142.1 hypothetical protein -
  M9H69_RS05285 (M9H69_05285) - 1024188..1024580 (-) 393 WP_250316143.1 hypothetical protein -
  M9H69_RS05290 (M9H69_05290) - 1024562..1025815 (-) 1254 WP_250316144.1 hypothetical protein -
  M9H69_RS05295 (M9H69_05295) - 1025815..1026237 (-) 423 WP_250316145.1 hypothetical protein -
  M9H69_RS05300 (M9H69_05300) - 1026310..1027542 (-) 1233 WP_250316146.1 hypothetical protein -
  M9H69_RS05305 (M9H69_05305) - 1027542..1027985 (-) 444 WP_250316147.1 hypothetical protein -
  M9H69_RS05310 (M9H69_05310) - 1028037..1028393 (-) 357 WP_250316148.1 hypothetical protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41291.38 Da        Isoelectric Point: 9.5850

>NTDB_id=596606 M9H69_RS05275 WP_250316141.1 1022697..1023767(-) (xerS) [Streptococcus oralis strain HP01]
MKREILLERIDKLKQIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYDRFFSWVLESGISNADKMSDIPLSVLENMSKKDME
AFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETEGFLTYIDQEYPQQLSNRALSSFNKNKERDLAIIALLLASGVRLYEAVNLDLRDLNLKMMVIDVTRKGGKRDS
VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=596606 M9H69_RS05275 WP_250316141.1 1022697..1023767(-) (xerS) [Streptococcus oralis strain HP01]
ATGAAACGTGAGATTTTACTGGAACGAATCGACAAACTAAAACAAATCATGCCCTGGTATGTTCTGGAATACTACCAATC
AAAGCTTGCTGTTCCCTACAGTTTTACAACTCTGTACGAATACCTCAAGGAATACGATCGATTTTTCAGCTGGGTTTTGG
AGTCTGGTATTTCAAATGCTGATAAAATGTCTGATATTCCTTTATCTGTCTTGGAAAATATGTCTAAGAAAGATATGGAA
GCTTTTATCCTATATCTACGTGAACGTCCATTGCTGAATGCCAATACAACCAAACAAGGTGTCTCTCAGACGACCATTAA
TCGGACTTTGTCGGCACTTTCTAGTCTTTACAAGTATCTAACAGAGGAGGTTGAAAACGACCAAGGGGAGCCTTATTTCT
ATCGTAATGTAATGAAGAAAGTTTCAACCAAGAAAAAGAAAGAAACACTTGCTTCCAGAGCTGAAAACATCAAGCAAAAA
CTCTTTCTAGGTGATGAAACAGAAGGTTTTCTGACTTATATCGACCAAGAGTACCCACAACAACTCTCAAATCGCGCTCT
CTCGTCATTTAATAAGAATAAAGAACGTGATTTGGCCATTATTGCCCTTCTCTTGGCATCTGGTGTTCGCTTATATGAAG
CTGTTAACCTGGACCTAAGAGACCTTAATCTCAAAATGATGGTCATTGATGTCACTCGAAAAGGGGGGAAACGTGATTCT
GTCAATGTCGCTGCTTTTGCTAAGCCTTACCTAGAGAATTATCTAGCCATTCGAAATCAACGTTATAAGACGGAAAAGAC
GGATACAGCACTCTTTCTGACCTTATACCGTGGCGTTCCCAATCGTATTGATGCTTCTAGCGTTGAAAAGATGGTTGCTA
AGTACTCTGAGGACTTTAAAGTCCGTGTAACTCCCCACAAACTCCGCCATACCTTAGCAACCAGACTCTATGATGCAACT
AAATCGCAAGTTTTGGTCAGCCACCAATTAGGACATGCCAGCACGCAAGTCACTGACCTCTATACCCATATCGTAAATGA
TGAACAAAAAAATGCTCTAGATAGTTTATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

98.315

100

0.983