Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   M9H69_RS04775 Genome accession   NZ_CP097843
Coordinates   912641..914308 (+) Length   555 a.a.
NCBI ID   WP_250316064.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 907641..919308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS04745 (M9H69_04745) udk 908233..908871 (+) 639 WP_009730252.1 uridine kinase -
  M9H69_RS04750 (M9H69_04750) xseA 909000..910340 (+) 1341 WP_250316061.1 exodeoxyribonuclease VII large subunit -
  M9H69_RS04755 (M9H69_04755) - 910318..910530 (+) 213 WP_000043226.1 exodeoxyribonuclease VII small subunit -
  M9H69_RS04760 (M9H69_04760) - 910527..911402 (+) 876 WP_250316062.1 polyprenyl synthetase family protein -
  M9H69_RS04765 (M9H69_04765) - 911395..912210 (+) 816 WP_250316063.1 TlyA family RNA methyltransferase -
  M9H69_RS04770 (M9H69_04770) - 912203..912634 (+) 432 WP_001034409.1 arginine repressor -
  M9H69_RS04775 (M9H69_04775) recN 912641..914308 (+) 1668 WP_250316064.1 DNA repair protein RecN Machinery gene
  M9H69_RS04780 (M9H69_04780) - 914309..915037 (+) 729 WP_250316065.1 metallophosphoesterase family protein -
  M9H69_RS04785 (M9H69_04785) lepA 915116..916939 (+) 1824 WP_250316066.1 translation elongation factor 4 -
  M9H69_RS04790 (M9H69_04790) - 917078..917701 (+) 624 WP_000734764.1 hypothetical protein -
  M9H69_RS04795 (M9H69_04795) dprA/cilB/dalA 917782..918630 (+) 849 WP_250316067.1 DNA-processing protein DprA Machinery gene

Sequence

Protein


Download         Length: 555 a.a.        Molecular weight: 62707.98 Da        Isoelectric Point: 4.5112

>NTDB_id=596595 M9H69_RS04775 WP_250316064.1 912641..914308(+) (recN) [Streptococcus oralis strain HP01]
MLLEISIKNFAIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNLMLGARATTDVIRHGAPKAEIEGLFSVENSRSLQELF
DEQGLEMGDEIIIRREILQNGRSVSRVNGQMVNLSVLRAIGQHLVDIHGQHDQEELMRPQLHIQMLDEFGDAAFLDLKET
YQTSFDAYRKMRKQVLEVKKNQQEHKSRIEMLEFQMAEIEAANLQAGEDLALNQERDKLLNHKNIADTLTNAYSMLDNEE
FSSLANVRSAMNDMESVEEYDPEYREISSSLSETYYVLEDITKRLEDIIEDLDFDGNRLMQVENRLDLLNTISRKYGGTV
DDVLLYFAKITDEYNLLTGNNLSSEDMEAELKKLEINLVDLAGQLATARHDLAQQLEAEIKQELQDLYMEKAQFQVRFSK
GKFSREGNETVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFSRKEGKTSIVFDEVDTGVSGRVAQAIAQKIHKIG
QHGQVLAISHLPQVIAIADYQFFIEKISDEHSTVSTVRLLTLEERVEEVAKMLAGENVTEAALTQARELLQTREK

Nucleotide


Download         Length: 1668 bp        

>NTDB_id=596595 M9H69_RS04775 WP_250316064.1 912641..914308(+) (recN) [Streptococcus oralis strain HP01]
ATGTTACTTGAAATTTCGATAAAAAACTTTGCCATTATTGAGGCAATTTCCCTCAATTTTGAAAAGGGTATGACTGTTTT
GACTGGGGAAACGGGTGCCGGAAAGTCTATCATTATCGACGCTATGAATCTCATGTTGGGGGCTCGTGCAACGACAGACG
TTATTCGTCATGGTGCGCCAAAGGCGGAGATTGAGGGACTTTTTTCGGTTGAAAACAGTCGTTCTTTGCAAGAACTTTTT
GATGAGCAAGGTTTGGAAATGGGTGATGAAATTATCATCCGCCGGGAAATTTTGCAAAATGGTCGTAGTGTTAGTCGCGT
GAATGGTCAGATGGTCAATCTTTCTGTCTTGCGTGCTATTGGGCAACACCTTGTAGATATCCATGGTCAGCATGACCAAG
AGGAGTTAATGCGTCCTCAACTGCACATCCAGATGTTGGATGAGTTTGGTGATGCAGCTTTCTTGGACTTGAAGGAGACC
TATCAGACGAGTTTTGACGCCTATCGCAAAATGCGTAAGCAGGTTCTAGAAGTCAAGAAAAATCAGCAGGAACATAAGTC
TCGCATTGAGATGTTGGAATTTCAAATGGCAGAGATTGAGGCAGCGAACTTGCAGGCTGGTGAAGACTTGGCTCTCAACC
AAGAACGAGATAAACTCCTCAATCATAAAAATATTGCGGATACGCTAACCAATGCCTATAGCATGTTGGACAATGAGGAG
TTTTCTAGCCTAGCTAATGTTCGTTCAGCCATGAATGACATGGAAAGTGTTGAAGAATACGATCCTGAATACCGTGAAAT
TTCAAGTTCTCTATCAGAAACCTACTATGTTTTAGAAGATATTACAAAGCGTTTGGAAGATATTATTGAGGACTTGGATT
TTGATGGCAATCGCCTCATGCAGGTTGAGAATCGCCTAGATCTTCTGAATACTATTTCCCGTAAGTACGGTGGGACTGTG
GATGATGTTCTGCTTTATTTTGCTAAGATTACAGATGAGTATAATCTCTTGACGGGTAATAATCTTTCTTCCGAAGACAT
GGAAGCAGAGCTCAAGAAATTGGAAATTAATCTTGTTGATTTGGCAGGGCAGCTTGCAACAGCTCGTCATGATTTGGCCC
AGCAGCTTGAAGCAGAGATTAAACAAGAACTGCAAGACCTCTATATGGAGAAGGCACAATTCCAGGTTCGCTTTAGCAAG
GGCAAATTTAGTCGAGAGGGGAATGAAACGGTCGAGTTTTACATTTCCACCAACCCTGGTGAAGACTTTAAACCCTTGGT
TAAAGTTGCGTCCGGTGGGGAATTGTCCCGCCTCATGCTAGCTATTAAATCCGCCTTTTCTCGTAAAGAAGGCAAGACTA
GTATTGTCTTTGATGAGGTGGATACGGGAGTTTCAGGTCGTGTAGCCCAAGCCATCGCTCAAAAGATTCATAAGATTGGC
CAGCATGGTCAGGTTTTAGCTATTTCTCACTTACCACAAGTGATTGCCATCGCGGACTATCAATTCTTTATTGAGAAGAT
TAGCGATGAGCACTCAACGGTGTCGACGGTTCGTCTTTTGACTTTAGAAGAGCGAGTAGAGGAAGTAGCTAAAATGTTGG
CTGGGGAAAATGTAACCGAAGCGGCCCTTACCCAAGCTAGAGAATTATTGCAAACGAGGGAGAAATAA

Domains

Predicted by InterProScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

43.134

100

0.441