Detailed information NTG0059656

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J68_RS02570
• Genome accession: NZ_AP018773
• Coordinates: 514179..515177 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain CHBN-III-2 isolate 13H39
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 509179..520177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J68_RS02545 (CHBNIII2_04860)	tehA	510155..511099 (+)	945	WP_011961658.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J68_RS02550 (CHBNIII2_04870)	tsaA	511154..511873 (-)	720	WP_005686995.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J68_RS02555 (CHBNIII2_04880)	menA	511935..512846 (+)	912	WP_005686994.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J68_RS02560 (CHBNIII2_04890)	rraA	512898..513386 (+)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
K6J68_RS02565 (CHBNIII2_04900)	-	513521..514072 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J68_RS02570 (CHBNIII2_04910)	cytR	514179..515177 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
K6J68_RS02575 (CHBNIII2_04920)	rbsK	515204..516124 (-)	921	WP_005686990.1	ribokinase	-
K6J68_RS02580 (CHBNIII2_04930)	rbsB	516222..517100 (-)	879	WP_011961659.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J68_RS02585 (CHBNIII2_04940)	rbsC	517120..518088 (-)	969	WP_005686986.1	ribose ABC transporter permease	-
K6J68_RS02590 (CHBNIII2_04950)	rbsA	518104..519585 (-)	1482	WP_014550384.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J68_RS02595 (CHBNIII2_04960)	rbsD	519599..520018 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=59656 K6J68_RS02570 WP_005686992.1 514179..515177(-) (cytR) [Haemophilus influenzae strain CHBN-III-2 isolate 13H39]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59656 K6J68_RS02570 WP_005686992.1 514179..515177(-) (cytR) [Haemophilus influenzae strain CHBN-III-2 isolate 13H39]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361