Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AW27_RS08155 Genome accession   NZ_CP097800
Coordinates   2025867..2026661 (+) Length   264 a.a.
NCBI ID   WP_037929793.1    Uniprot ID   -
Organism   Streptomyces sp. PCS3-D2 isolate P1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2020867..2031661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AW27_RS08145 (AW27_008125) - 2021848..2024739 (-) 2892 WP_037930006.1 vitamin B12-dependent ribonucleotide reductase -
  AW27_RS08150 (AW27_008130) nrdR 2024885..2025397 (-) 513 WP_030838121.1 transcriptional regulator NrdR -
  AW27_RS08155 (AW27_008135) dinR/lexA 2025867..2026661 (+) 795 WP_037929793.1 transcriptional repressor LexA Regulator
  AW27_RS08160 (AW27_008140) - 2026765..2028735 (-) 1971 WP_037929796.1 ATP-dependent DNA helicase -
  AW27_RS08165 (AW27_008145) - 2028789..2030663 (-) 1875 WP_037929799.1 IucA/IucC family siderophore biosynthesis protein -
  AW27_RS08170 (AW27_008150) - 2030765..2031472 (-) 708 WP_078557146.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28589.36 Da        Isoelectric Point: 7.4239

>NTDB_id=596495 AW27_RS08155 WP_037929793.1 2025867..2026661(+) (dinR/lexA) [Streptomyces sp. PCS3-D2 isolate P1]
MTTTADSAAITAQNRSQNRLEPVHAMNDANLNPETDAAVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=596495 AW27_RS08155 WP_037929793.1 2025867..2026661(+) (dinR/lexA) [Streptomyces sp. PCS3-D2 isolate P1]
GTGACCACCACCGCAGACAGTGCCGCCATCACTGCCCAGAACCGCTCCCAGAACCGACTCGAGCCGGTGCATGCCATGAA
CGACGCAAACCTGAACCCGGAGACGGACGCCGCGGTGCGCCCCGCGCGCTCGCTGCCAGGTCGACCTCCAGGCATTCGCG
CCGACAGCTCCGGGCTCACGGACCGGCAGCGGCGGGTCATCGAAGTCATTCGCGACTCCGTGCAGCGCCGTGGTTACCCG
CCGTCGATGCGGGAGATCGGCCAGGCGGTCGGCCTGTCCAGCACGTCGTCGGTGGCCCACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGGCCCCGGGCCTACGAGGTGCGCGGCTCCGACCAGCCCAGCTCGCAGCCCA
CGGACACCACCGGCAAGCCCGCCGCCTCCTATGTTCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAG
GAGTCGGTCGAGGACGTGTTCCCGCTCCCCCGCCAGCTCGTCGGTGACGGGGAGCTCTTCGTCCTCAAGGTCGTCGGCGA
CTCGATGATCGAGGCAGCCATCTGTGACGGCGACTGGGTCACGGTCCGCCGACAGCCCGTCGCGGAGAACGGCGACATCG
TCGCCGCGATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTGTGGCTCCTCCCGCACAAC
GCCGCCTACCAGCCGATTCCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTCGCGGTTCTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375