Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K4756_RS04560 Genome accession   NZ_CP081458
Coordinates   894708..895499 (+) Length   263 a.a.
NCBI ID   WP_015383146.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ps4060     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 889708..900499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K4756_RS04530 (K4756_04510) sxzA 890547..891578 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  K4756_RS04535 (K4756_04515) yfhB 891693..892574 (+) 882 WP_015383143.1 PhzF family phenazine biosynthesis isomerase -
  K4756_RS04540 (K4756_04520) yfhC 892662..893246 (+) 585 WP_015482973.1 nitroreductase -
  K4756_RS04545 (K4756_04525) yfhD 893285..893476 (-) 192 WP_003233561.1 YfhD family protein -
  K4756_RS04550 (K4756_04530) yfhE 893543..893653 (-) 111 WP_003223230.1 YfhE family protein -
  K4756_RS04555 (K4756_04535) yfhF 893708..894619 (-) 912 WP_038428645.1 TIGR01777 family oxidoreductase -
  K4756_RS04560 (K4756_04540) recX 894708..895499 (+) 792 WP_015383146.1 recombination regulator RecX Regulator
  K4756_RS04565 (K4756_04545) yfhH 895508..895822 (+) 315 WP_015383147.1 YfhH family protein -
  K4756_RS04570 (K4756_04550) yfhI 895965..897158 (+) 1194 WP_015482975.1 MFS transporter -
  K4756_RS04575 (K4756_04555) sspK 897190..897342 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  K4756_RS04580 (K4756_04560) yfhJ 897467..897736 (+) 270 WP_003243789.1 YfhJ family protein -
  K4756_RS04585 (K4756_04565) yfhK 897881..898399 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  K4756_RS04590 (K4756_04570) spdL 898484..898816 (+) 333 WP_041517766.1 SdpC immunity protein SpdL -
  K4756_RS04595 (K4756_04575) ephM 898803..899663 (+) 861 WP_015383151.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30898.10 Da        Isoelectric Point: 6.6690

>NTDB_id=596478 K4756_RS04560 WP_015383146.1 894708..895499(+) (recX) [Bacillus subtilis subsp. subtilis strain ps4060]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EEHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=596478 K4756_RS04560 WP_015383146.1 894708..895499(+) (recX) [Bacillus subtilis subsp. subtilis strain ps4060]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGAGCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGGGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTACGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.24

100

0.992