Detailed information NTG0596470

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M9O78_RS22360
• Genome accession: NZ_CP097726
• Coordinates: 4713171..4714196 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS1050
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4708171..4719196

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M9O78_RS22340 (M9O78_22340)	metJ	4709356..4709673 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M9O78_RS22345 (M9O78_22345)	yiiX	4709733..4710341 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
M9O78_RS22350 (M9O78_22350)	rpmE	4710402..4710614 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M9O78_RS22355 (M9O78_22355)	priA	4710817..4713015 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
M9O78_RS22360 (M9O78_22360)	cytR	4713171..4714196 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M9O78_RS22365 (M9O78_22365)	ftsN	4714288..4715247 (+)	960	WP_000068844.1	cell division protein FtsN	-
M9O78_RS22370 (M9O78_22370)	hslV	4715340..4715870 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M9O78_RS22375 (M9O78_22375)	hslU	4715880..4717211 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M9O78_RS22380 (M9O78_22380)	menA	4717278..4718204 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M9O78_RS22385 (M9O78_22385)	rraA	4718297..4718782 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=596470 M9O78_RS22360 WP_000644904.1 4713171..4714196(+) (cytR) [Escherichia coli strain MS1050]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=596470 M9O78_RS22360 WP_000644904.1 4713171..4714196(+) (cytR) [Escherichia coli strain MS1050]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628