Detailed information NTG0596386

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M9O75_RS21980
• Genome accession: NZ_CP097724
• Coordinates: 4544841..4545866 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS1494
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4539841..4550866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M9O75_RS21960 (M9O75_21960)	metJ	4541026..4541343 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M9O75_RS21965 (M9O75_21965)	yiiX	4541403..4542011 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
M9O75_RS21970 (M9O75_21970)	rpmE	4542072..4542284 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M9O75_RS21975 (M9O75_21975)	priA	4542487..4544685 (+)	2199	WP_267326329.1	primosomal protein N'	Machinery gene
M9O75_RS21980 (M9O75_21980)	cytR	4544841..4545866 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
M9O75_RS21985 (M9O75_21985)	ftsN	4545958..4546917 (+)	960	WP_000068834.1	cell division protein FtsN	-
M9O75_RS21990 (M9O75_21990)	hslV	4547010..4547540 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M9O75_RS21995 (M9O75_21995)	hslU	4547550..4548881 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M9O75_RS22000 (M9O75_22000)	menA	4548948..4549874 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M9O75_RS22005 (M9O75_22005)	rraA	4549967..4550452 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M9O75_RS22010 (M9O75_22010)	zapB	4550537..4550782 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=596386 M9O75_RS21980 WP_000644911.1 4544841..4545866(+) (cytR) [Escherichia coli strain MS1494]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=596386 M9O75_RS21980 WP_000644911.1 4544841..4545866(+) (cytR) [Escherichia coli strain MS1494]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625