Detailed information NTG0596221

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M9O74_RS23910
• Genome accession: NZ_CP097719
• Coordinates: 4879097..4880122 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MS1679
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4874097..4885122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M9O74_RS23890 (M9O74_23895)	metJ	4875282..4875599 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M9O74_RS23895 (M9O74_23900)	yiiX	4875659..4876267 (+)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
M9O74_RS23900 (M9O74_23905)	rpmE	4876328..4876540 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M9O74_RS23905 (M9O74_23910)	priA	4876743..4878941 (+)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
M9O74_RS23910 (M9O74_23915)	cytR	4879097..4880122 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M9O74_RS23915 (M9O74_23920)	ftsN	4880214..4881173 (+)	960	WP_000068818.1	cell division protein FtsN	-
M9O74_RS23920 (M9O74_23925)	hslV	4881266..4881796 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M9O74_RS23925 (M9O74_23930)	hslU	4881806..4883137 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M9O74_RS23930 (M9O74_23935)	menA	4883204..4884130 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M9O74_RS23935 (M9O74_23940)	rraA	4884223..4884708 (+)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
M9O74_RS23940 (M9O74_23945)	zapB	4884793..4885038 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=596221 M9O74_RS23910 WP_000644904.1 4879097..4880122(+) (cytR) [Escherichia coli strain MS1679]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=596221 M9O74_RS23910 WP_000644904.1 4879097..4880122(+) (cytR) [Escherichia coli strain MS1679]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628