Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   K1X69_RS10020 Genome accession   NZ_CP081354
Coordinates   2030336..2031379 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain SQL1     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2025336..2036379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K1X69_RS09990 (K1X69_09990) - 2025754..2027010 (-) 1257 WP_001795438.1 aminopeptidase -
  K1X69_RS09995 (K1X69_09995) - 2027013..2027213 (-) 201 WP_000180461.1 DUF1128 family protein -
  K1X69_RS10000 (K1X69_10000) - 2027360..2027824 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  K1X69_RS10005 (K1X69_10005) - 2027831..2028106 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  K1X69_RS10010 (K1X69_10010) - 2028384..2029601 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  K1X69_RS10015 (K1X69_10015) vraR 2029717..2030346 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  K1X69_RS10020 (K1X69_10020) vraS 2030336..2031379 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  K1X69_RS10025 (K1X69_10025) liaF 2031376..2032077 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  K1X69_RS10030 (K1X69_10030) - 2032092..2032478 (-) 387 WP_001110179.1 hypothetical protein -
  K1X69_RS10035 (K1X69_10035) map 2032695..2033453 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  K1X69_RS10040 (K1X69_10040) - 2033981..2034967 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  K1X69_RS10045 (K1X69_10045) - 2035398..2035811 (-) 414 WP_001549145.1 hypothetical protein -
  K1X69_RS10050 (K1X69_10050) - 2035840..2035950 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=596135 K1X69_RS10020 WP_001017131.1 2030336..2031379(-) (vraS) [Staphylococcus aureus strain SQL1]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=596135 K1X69_RS10020 WP_001017131.1 2030336..2031379(-) (vraS) [Staphylococcus aureus strain SQL1]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1