Detailed information NTG0596009

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: K5B02_RS02170
• Genome accession: NZ_CP081345
• Coordinates: 474784..475932 (+)
• Length: 382 a.a.
• NCBI ID: WP_003100959.1
• Uniprot ID: G3XCX3
• Organism: Pseudomonas aeruginosa strain F291007
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 469784..480932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5B02_RS02145 (K5B02_02145)	-	470935..471231 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
K5B02_RS02150 (K5B02_02150)	-	471228..471821 (-)	594	WP_003084544.1	YggT family protein	-
K5B02_RS02155 (K5B02_02155)	proC	471832..472653 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
K5B02_RS02160 (K5B02_02160)	-	472665..473357 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
K5B02_RS02165 (K5B02_02165)	pilT	473572..474606 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
K5B02_RS02170 (K5B02_02170)	pilU	474784..475932 (+)	1149	WP_003100959.1	type IV pilus ATPase PilU	Machinery gene
K5B02_RS02175 (K5B02_02175)	czcD	475940..476839 (-)	900	WP_003084557.1	CDF family zinc transporter CzcD	-
K5B02_RS02180 (K5B02_02180)	-	476994..477398 (+)	405	WP_003084560.1	NINE protein	-
K5B02_RS02185 (K5B02_02185)	-	477641..479014 (+)	1374	WP_003084562.1	pyridoxal-phosphate dependent enzyme	-
K5B02_RS02190 (K5B02_02190)	-	479011..480195 (+)	1185	WP_003084564.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42532.81 Da
• Isoelectric Point: 6.7792

>NTDB_id=596009 K5B02_RS02170 WP_003100959.1 474784..475932(+) (pilU) [Pseudomonas aeruginosa strain F291007]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSSLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=596009 K5B02_RS02170 WP_003100959.1 474784..475932(+) (pilU) [Pseudomonas aeruginosa strain F291007]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAATTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACTCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAGCCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: G3XCX3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.482	100	0.885
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382