Detailed information NTG0059593

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J58_RS02580
• Genome accession: NZ_AP018772
• Coordinates: 516323..517321 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain CHBN-III-1 isolate 15H02
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 511323..522321

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J58_RS02555 (CHBNIII1_04920)	tehA	512299..513243 (+)	945	WP_005686997.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J58_RS02560 (CHBNIII1_04930)	tsaA	513298..514017 (-)	720	WP_005686995.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J58_RS02565 (CHBNIII1_04940)	menA	514079..514990 (+)	912	WP_005686994.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J58_RS02570 (CHBNIII1_04950)	rraA	515042..515530 (+)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
K6J58_RS02575 (CHBNIII1_04960)	-	515665..516216 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J58_RS02580 (CHBNIII1_04970)	cytR	516323..517321 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
K6J58_RS02585 (CHBNIII1_04980)	rbsK	517348..518268 (-)	921	WP_005686990.1	ribokinase	-
K6J58_RS02590 (CHBNIII1_04990)	rbsB	518366..519244 (-)	879	WP_005686988.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J58_RS02595 (CHBNIII1_05000)	rbsC	519264..520232 (-)	969	WP_005686986.1	ribose ABC transporter permease	-
K6J58_RS02600 (CHBNIII1_05010)	rbsA	520248..521729 (-)	1482	WP_005686985.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J58_RS02605 (CHBNIII1_05020)	rbsD	521743..522162 (-)	420	WP_005686983.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=59593 K6J58_RS02580 WP_005686992.1 516323..517321(-) (cytR) [Haemophilus influenzae strain CHBN-III-1 isolate 15H02]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=59593 K6J58_RS02580 WP_005686992.1 516323..517321(-) (cytR) [Haemophilus influenzae strain CHBN-III-1 isolate 15H02]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
GTCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361