Detailed information NTG0595064

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M8Y68_RS21835
• Genome accession: NZ_CP097430
• Coordinates: 4491928..4492953 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C288
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4486928..4497953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8Y68_RS21815 (M8Y68_21815)	metJ	4487989..4488306 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M8Y68_RS21820 (M8Y68_21820)	yiiX	4488490..4489098 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M8Y68_RS21825 (M8Y68_21825)	rpmE	4489159..4489371 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M8Y68_RS21830 (M8Y68_21830)	priA	4489574..4491772 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
M8Y68_RS21835 (M8Y68_21835)	cytR	4491928..4492953 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M8Y68_RS21840 (M8Y68_21840)	ftsN	4493045..4494004 (+)	960	WP_000068828.1	cell division protein FtsN	-
M8Y68_RS21845 (M8Y68_21845)	hslV	4494097..4494627 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M8Y68_RS21850 (M8Y68_21850)	hslU	4494637..4495968 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M8Y68_RS21855 (M8Y68_21855)	menA	4496035..4496961 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M8Y68_RS21860 (M8Y68_21860)	rraA	4497054..4497539 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M8Y68_RS21865 (M8Y68_21865)	zapB	4497624..4497869 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=595064 M8Y68_RS21835 WP_000644904.1 4491928..4492953(+) (cytR) [Escherichia coli strain C288]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=595064 M8Y68_RS21835 WP_000644904.1 4491928..4492953(+) (cytR) [Escherichia coli strain C288]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628