Detailed information NTG0594985

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M8Y67_RS21780
• Genome accession: NZ_CP097426
• Coordinates: 4484234..4485259 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C289
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4479234..4490259

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8Y67_RS21760 (M8Y67_21760)	metJ	4480295..4480612 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M8Y67_RS21765 (M8Y67_21765)	yiiX	4480796..4481404 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
M8Y67_RS21770 (M8Y67_21770)	rpmE	4481465..4481677 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M8Y67_RS21775 (M8Y67_21775)	priA	4481880..4484078 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
M8Y67_RS21780 (M8Y67_21780)	cytR	4484234..4485259 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M8Y67_RS21785 (M8Y67_21785)	ftsN	4485351..4486310 (+)	960	WP_000068828.1	cell division protein FtsN	-
M8Y67_RS21790 (M8Y67_21790)	hslV	4486403..4486933 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M8Y67_RS21795 (M8Y67_21795)	hslU	4486943..4488274 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
M8Y67_RS21800 (M8Y67_21800)	menA	4488341..4489267 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M8Y67_RS21805 (M8Y67_21805)	rraA	4489360..4489845 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M8Y67_RS21810 (M8Y67_21810)	zapB	4489930..4490175 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=594985 M8Y67_RS21780 WP_000644904.1 4484234..4485259(+) (cytR) [Escherichia coli strain C289]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=594985 M8Y67_RS21780 WP_000644904.1 4484234..4485259(+) (cytR) [Escherichia coli strain C289]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628