Detailed information NTG0594766

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: K3A92_RS16635
• Genome accession: NZ_CP080760
• Coordinates: 3392212..3393375 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain B4-7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3387212..3398375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K3A92_RS16605 (K3A92_16605)	-	3387476..3387895 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
K3A92_RS16610 (K3A92_16610)	comFC	3387969..3388658 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
K3A92_RS16615 (K3A92_16615)	-	3388664..3388948 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
K3A92_RS16620 (K3A92_16620)	comFA	3389006..3390391 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
K3A92_RS16625 (K3A92_16625)	-	3390500..3391348 (-)	849	WP_032876160.1	DegV family protein	-
K3A92_RS16630 (K3A92_16630)	degU	3391446..3392135 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
K3A92_RS16635 (K3A92_16635)	degS	3392212..3393375 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
K3A92_RS16640 (K3A92_16640)	-	3393598..3394245 (+)	648	WP_007614107.1	YigZ family protein	-
K3A92_RS16645 (K3A92_16645)	-	3394250..3395431 (+)	1182	WP_032876157.1	LCP family protein	-
K3A92_RS16650 (K3A92_16650)	-	3395530..3396606 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
K3A92_RS16655 (K3A92_16655)	-	3396739..3397935 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=594766 K3A92_RS16635 WP_007407484.1 3392212..3393375(-) (degS) [Bacillus velezensis strain B4-7]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=594766 K3A92_RS16635 WP_007407484.1 3392212..3393375(-) (degS) [Bacillus velezensis strain B4-7]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951