Detailed information NTG0594753

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M7748_RS22015
• Genome accession: NZ_CP097370
• Coordinates: 4587486..4588511 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain AGR5151
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4582486..4593511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M7748_RS21995 (M7748_21995)	metJ	4583671..4583988 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M7748_RS22000 (M7748_22000)	yiiX	4584048..4584656 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M7748_RS22005 (M7748_22005)	rpmE	4584717..4584929 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M7748_RS22010 (M7748_22010)	priA	4585132..4587330 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M7748_RS22015 (M7748_22015)	cytR	4587486..4588511 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M7748_RS22020 (M7748_22020)	ftsN	4588603..4589562 (+)	960	WP_000068834.1	cell division protein FtsN	-
M7748_RS22025 (M7748_22025)	hslV	4589655..4590185 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M7748_RS22030 (M7748_22030)	hslU	4590195..4591526 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M7748_RS22035 (M7748_22035)	menA	4591593..4592519 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M7748_RS22040 (M7748_22040)	rraA	4592612..4593097 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M7748_RS22045 (M7748_22045)	zapB	4593182..4593427 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=594753 M7748_RS22015 WP_000644908.1 4587486..4588511(+) (cytR) [Escherichia coli strain AGR5151]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=594753 M7748_RS22015 WP_000644908.1 4587486..4588511(+) (cytR) [Escherichia coli strain AGR5151]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625