Detailed information NTG0059466

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J57_RS02610
• Genome accession: NZ_AP018770
• Coordinates: 529432..530436 (-)
• Length: 334 a.a.
• NCBI ID: WP_042599442.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-II-7 isolate 13H35
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 524432..535436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J57_RS02585 (CHBNII7_04840)	tehA	525414..526358 (+)	945	WP_042593301.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J57_RS02590 (CHBNII7_04850)	tsaA	526407..527126 (-)	720	WP_042599439.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J57_RS02595 (CHBNII7_04860)	menA	527188..528099 (+)	912	WP_042599440.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J57_RS02600 (CHBNII7_04870)	rraA	528151..528639 (+)	489	WP_042599441.1	ribonuclease E activity regulator RraA	-
K6J57_RS02605 (CHBNII7_04880)	-	528771..529322 (-)	552	WP_005632696.1	TIGR00645 family protein	-
K6J57_RS02610 (CHBNII7_04890)	cytR	529432..530436 (-)	1005	WP_042599442.1	substrate-binding domain-containing protein	Regulator
K6J57_RS02615 (CHBNII7_04900)	rbsK	530464..531384 (-)	921	WP_042593304.1	ribokinase	-
K6J57_RS02620 (CHBNII7_04910)	rbsB	531482..532360 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J57_RS02625 (CHBNII7_04920)	rbsC	532380..533348 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J57_RS02630 (CHBNII7_04930)	rbsA	533364..534845 (-)	1482	WP_011272089.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J57_RS02635 (CHBNII7_04940)	rbsD	534859..535278 (-)	420	WP_005664526.1	D-ribose pyranase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36758.43 Da
• Isoelectric Point: 7.6607

>NTDB_id=59466 K6J57_RS02610 WP_042599442.1 529432..530436(-) (cytR) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWVIESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVEALLQRIKNPNENYRTLVLEP
TCILRGSISTPSNI

Nucleotide

• Length: 1005 bp

>NTDB_id=59466 K6J57_RS02610 WP_042599442.1 529432..530436(-) (cytR) [Haemophilus influenzae strain CHBN-II-7 isolate 13H35]
ATGGCGACAATGAAAGATATTGCTCGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGAGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCGGAAGTGATGGCAGGC
GTGGAACAATATTGTCAGCAGCATCAATATAATCTTATTATTGCCACCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCACTGCCACTCGTTGTAATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATCGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGGTTA
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTTGCTGTAGAAGCACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTAGTGTTAGAGCCG
ACCTGTATTTTGAGAGGATCAATTTCTACCCCTTCAAACATATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.747	99.401	0.365
cytR	Vibrio cholerae C6706	36.228	100	0.362