Detailed information NTG0594547

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M7750_RS13760
• Genome accession: NZ_CP097363
• Coordinates: 2852525..2853550 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AGR6137
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2847525..2858550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M7750_RS13740 (M7750_13740)	metJ	2848710..2849027 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M7750_RS13745 (M7750_13745)	yiiX	2849087..2849695 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
M7750_RS13750 (M7750_13750)	rpmE	2849756..2849968 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M7750_RS13755 (M7750_13755)	priA	2850171..2852369 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
M7750_RS13760 (M7750_13760)	cytR	2852525..2853550 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
M7750_RS13765 (M7750_13765)	ftsN	2853642..2854601 (+)	960	WP_000068844.1	cell division protein FtsN	-
M7750_RS13770 (M7750_13770)	hslV	2854694..2855224 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M7750_RS13775 (M7750_13775)	hslU	2855234..2856565 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M7750_RS13780 (M7750_13780)	menA	2856632..2857558 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M7750_RS13785 (M7750_13785)	rraA	2857651..2858136 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=594547 M7750_RS13760 WP_000644904.1 2852525..2853550(+) (cytR) [Escherichia coli strain AGR6137]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=594547 M7750_RS13760 WP_000644904.1 2852525..2853550(+) (cytR) [Escherichia coli strain AGR6137]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628