Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   K3G18_RS07720 Genome accession   NZ_CP080629
Coordinates   1482140..1482418 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus subtilis strain YPS-32     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477140..1487418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3G18_RS07700 (K3G18_07700) panEB 1478327..1479238 (+) 912 WP_032721491.1 ketopantoate reductase family protein -
  K3G18_RS07705 (K3G18_07705) ampS 1479272..1480504 (-) 1233 WP_003232341.1 aminopeptidase -
  K3G18_RS07710 (K3G18_07710) ykpC 1480614..1480748 (-) 135 WP_003238865.1 protein YkpC -
  K3G18_RS07715 (K3G18_07715) mreBH 1480849..1481856 (-) 1008 WP_003245743.1 cell shape-determining protein MreBH -
  K3G18_RS07720 (K3G18_07720) abrB 1482140..1482418 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  K3G18_RS07725 (K3G18_07725) kinC 1482608..1483894 (+) 1287 WP_003232333.1 two-component sensor histidine kinase KinC -
  K3G18_RS07730 (K3G18_07730) ykqA 1483910..1484737 (+) 828 WP_003232330.1 gamma-glutamylcyclotransferase -
  K3G18_RS07735 (K3G18_07735) ktrC 1484800..1485465 (+) 666 WP_003222311.1 Ktr system potassium transporter KtrC -
  K3G18_RS07740 (K3G18_07740) ade 1485621..1487354 (+) 1734 WP_032721495.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=594507 K3G18_RS07720 WP_003244728.1 1482140..1482418(+) (abrB) [Bacillus subtilis strain YPS-32]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=594507 K3G18_RS07720 WP_003244728.1 1482140..1482418(+) (abrB) [Bacillus subtilis strain YPS-32]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576