Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K3G18_RS05995 Genome accession   NZ_CP080629
Coordinates   1169801..1169992 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain YPS-32     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1164801..1174992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K3G18_RS05965 (K3G18_05965) argF 1165666..1166625 (+) 960 WP_032721338.1 ornithine carbamoyltransferase -
  K3G18_RS05970 (K3G18_05970) yjzC 1166711..1166890 (+) 180 WP_003245356.1 YjzC family protein -
  K3G18_RS05975 (K3G18_05975) yjzD 1166936..1167121 (-) 186 WP_029317607.1 YjzD family protein -
  K3G18_RS05980 (K3G18_05980) - 1167370..1168104 (+) 735 WP_032721340.1 hypothetical protein -
  K3G18_RS05985 (K3G18_05985) - 1168186..1168743 (+) 558 WP_032721343.1 hypothetical protein -
  K3G18_RS05990 (K3G18_05990) med 1168833..1169786 (+) 954 WP_032721344.1 transcriptional regulator Med Regulator
  K3G18_RS05995 (K3G18_05995) comZ 1169801..1169992 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  K3G18_RS06000 (K3G18_06000) yjzB 1170022..1170261 (-) 240 WP_003232972.1 spore coat protein YjzB -
  K3G18_RS06005 (K3G18_06005) fabH 1170426..1171364 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  K3G18_RS06010 (K3G18_06010) fabF 1171387..1172628 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  K3G18_RS06015 (K3G18_06015) yjaZ 1172704..1173489 (+) 786 WP_032721346.1 DUF2268 domain-containing protein -
  K3G18_RS06020 (K3G18_06020) appD 1173681..1174667 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=594497 K3G18_RS05995 WP_003224559.1 1169801..1169992(+) (comZ) [Bacillus subtilis strain YPS-32]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=594497 K3G18_RS05995 WP_003224559.1 1169801..1169992(+) (comZ) [Bacillus subtilis strain YPS-32]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1