Detailed information NTG0594497

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: M7749_RS23290
• Genome accession: NZ_CP097360
• Coordinates: 4808266..4809291 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain AGR4587
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4803266..4814291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M7749_RS23270 (M7749_23270)	metJ	4804451..4804768 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
M7749_RS23275 (M7749_23275)	yiiX	4804828..4805436 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
M7749_RS23280 (M7749_23280)	rpmE	4805497..4805709 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
M7749_RS23285 (M7749_23285)	priA	4805912..4808110 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
M7749_RS23290 (M7749_23290)	cytR	4808266..4809291 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
M7749_RS23295 (M7749_23295)	ftsN	4809383..4810342 (+)	960	WP_000068834.1	cell division protein FtsN	-
M7749_RS23300 (M7749_23300)	hslV	4810435..4810965 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
M7749_RS23305 (M7749_23305)	hslU	4810975..4812306 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
M7749_RS23310 (M7749_23310)	menA	4812373..4813299 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
M7749_RS23315 (M7749_23315)	rraA	4813392..4813877 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
M7749_RS23320 (M7749_23320)	zapB	4813962..4814207 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=594497 M7749_RS23290 WP_000644908.1 4808266..4809291(+) (cytR) [Escherichia coli strain AGR4587]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=594497 M7749_RS23290 WP_000644908.1 4808266..4809291(+) (cytR) [Escherichia coli strain AGR4587]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625