Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A9R16_RS02340 Genome accession   NZ_CP080624
Coordinates   472714..473112 (+) Length   132 a.a.
NCBI ID   WP_065971716.1    Uniprot ID   A0A1C2FZ92
Organism   Acidiferrobacter thiooxydans strain ZJ     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 467714..478112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9R16_RS02315 (A9R16_002340) ruvX 468149..468604 (-) 456 WP_065971666.1 Holliday junction resolvase RuvX -
  A9R16_RS02320 (A9R16_002345) - 468601..469164 (-) 564 WP_065971667.1 YqgE/AlgH family protein -
  A9R16_RS02325 (A9R16_002350) - 469349..470203 (-) 855 WP_065971668.1 energy transducer TonB family protein -
  A9R16_RS02330 (A9R16_002355) gshB 470215..471180 (-) 966 WP_065971669.1 glutathione synthase -
  A9R16_RS02335 (A9R16_002360) gshA 471177..472487 (-) 1311 WP_065971670.1 glutamate--cysteine ligase -
  A9R16_RS02340 (A9R16_002365) pilG 472714..473112 (+) 399 WP_065971716.1 response regulator Regulator
  A9R16_RS02345 (A9R16_002370) - 473173..473535 (+) 363 WP_065971671.1 response regulator -
  A9R16_RS02350 (A9R16_002375) - 473532..474077 (+) 546 WP_065971672.1 chemotaxis protein CheW -
  A9R16_RS02355 (A9R16_002380) - 474134..476263 (+) 2130 WP_083996153.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14869.30 Da        Isoelectric Point: 8.0723

>NTDB_id=594399 A9R16_RS02340 WP_065971716.1 472714..473112(+) (pilG) [Acidiferrobacter thiooxydans strain ZJ]
MAVRNVAARIPVSIKVMIIDDSNTIRRTAEALLKKAGYDVYTAGDGFEAMSVITDRRPDIIFVDIMMPRLDGYQTCLLIK
NNKDFKHIPVIMLSSKDGLFDKARGRIAGSEEHVNKPFTQEELVEVIARHVH

Nucleotide


Download         Length: 399 bp        

>NTDB_id=594399 A9R16_RS02340 WP_065971716.1 472714..473112(+) (pilG) [Acidiferrobacter thiooxydans strain ZJ]
ATGGCCGTCCGAAACGTAGCGGCGAGGATTCCCGTGAGTATCAAGGTTATGATAATCGATGACAGCAATACGATACGACG
AACGGCGGAGGCCCTTTTAAAGAAGGCGGGCTACGACGTCTACACGGCGGGGGACGGGTTCGAGGCCATGTCGGTCATTA
CCGACCGTCGGCCGGACATCATCTTCGTGGACATCATGATGCCCCGGCTAGACGGCTATCAGACCTGTCTTTTGATAAAA
AACAATAAAGACTTCAAGCATATACCGGTCATCATGCTTTCCAGTAAGGACGGCTTGTTCGACAAGGCGCGCGGACGTAT
CGCCGGATCCGAGGAGCATGTGAACAAACCCTTCACCCAGGAAGAGCTGGTGGAGGTCATTGCCCGGCATGTGCACTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1C2FZ92

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.706

90.152

0.583